Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01341 ATGGCTGTTTCCATGAGGGACTTGGATTCAGCTTTCCAGGGAGCTGGACAAAAGGCTGGACTGGAAATATGGCGTATTGAGAATTTCAATCCAGTTCCCATCCCGAAGTCCTCTTATGGGAAGTTTTTCACTGGGGACTCCTATGTAATCTTGAAGACAACTGCTTCAAAGAGTGGTGCCCTGCGTCATGATATTCATTACTGGCTTGGAAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCGTCAAGACAGTTGAGCTAGATGCAGCTCTTGGAGGCCGTGCTGTTCAATATCGTGAAGTGCAGGGTCATGAAACTGAAAAGTTCCTGTCTTACTTCAAACCCTGTATTATACCTCAGGAGGGCGGAGTTGCATCTGGTTTTAAGCATGTAGAGGATGAAGAATATAAGATTCGAATGTTTGTATGCAAAGGGAAACATGTTGTGCATGTCAAAGAGGTTCCTTTTGCCCGATCATCACTAAACCATGATGATATATTTATTCTGGATACGAAATCCAAAATCTTCCAATTTAATGGTTCAAATTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTGCAATATATTAAAGATACACACCATGATGGGAAATGCGAGGTAGCTGCGATTGAGGATGGGAAGTTGATGGCTGATCCCGAAACGGGAGAATTCTGGGGTTTCTTTGGGGGTTTTGCCCCTCTTCCACGAAAACCAGCTAGTGATGATGATCAGCATGTTGATACTTATCCTCCAAAGCTGCTTAGCATTGAAAAGGGGGTAGCTGAACCCGTTAAGAACGAATCTCTGACAAGGGAGTTACTGGACACAAATAGATGCTATATTCTTGATTGTGGGCTGGAAGTGTTTGTCTGGATGGGAAGAAATACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGCAGCTGATGAGTTAGTCAGTGGCTCCGATCGACAGAAATCCCAGATAATTCGTGTAATTGAAGGATTTGAAACAGTGATGTTCAAGTCCAAGTTTGATTCTTGGCCTGAAACGACTGAAGTAACTGTGTCTGAAGATGGTCGTGGAAAGGTGGCAGCACTTCTGAAGCGCCAAGGAGTGAATGTCAGGGGTCTGCTGAAAGCTGATCCGGTAAAAGAAGAACCTCAACCCTATATTGATTGCACAGGAAATTTGCAGGTTTGGCGTGTAAATGGTCAGGAAAAGATTCTCCTTCCTGCTTCTGATCAGTCAAAGCTTTATTGTGGAGATTGCTACATCTTTCAGTATACGTATCCTGGAGATGATAAGGAAGAGTATCTTATAGGAACATGGATTGGAAAGACTAGTGTTGAGGAAGAAAGAGCTTCAGCTATTTCACTGGCAAGCAAAATGGTTGAAATATTGAAGTTTCTTCCATCCCAGACTCGTATTTATGAAGGGAATGAGCCACTTCAATTTTATACTATCTTCCAAAGTTTGATTGTTTTTAAGGGTGGACTTAGTAATGGATACAAAAATTACATTGCGGAAAAGGAAATTCCTGATGATACGTACAGTGAGGATGGTGTTGCACTTTTTCGCATCCAGGGTTCAGGCCCAGACAATATGCAAGCTATACAAGTTGAACCAGTTGCTTCCTCATTGAATTCCTCTTACTGCTACATTCTTCATAATGGGTCCACTGTCTTTACATGGATTGGAAACCTTACAACCTCAGATGTTCAGGAACTTGTTGAGAGAATGCTAGATTTGATAAAGCCAAATTTACAATCAAAGCCCCAAAAGGAAGGGTCAGAATCTGAACAGTTCTGGGATTTGTTGGGAGGAAAATCTGAGTATCCTAGCCAGAAGATTGTAAGGTGTGCTGAAAGTGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGGAAATTTGAAGGTGTCGGAGATATTCAATTTTTCCCAGGATGATTTGATGACTGAAGATATTTTCATCTTATATTGTCACTCTGAAATCTTTGTCTGGGTTGGGCAGCAGGTTGACCCCAAGAGTCGAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCACGATTTCCTTTTAGAAAAGGTGTCTCTTGACACCCCGATATACATTGTCATGGAAGGGAGTGAGCCTCCTTTCTTCACTCGTTTCTTCACTTGGGAGTCTGCAAAATCTGCAATGCTTGGAAATTCGTTTCAGAGAAAACTCACAATAGTTAAAAATGGGGGAACTCCAACTGTGGATAAACCCAAACGAAGAACGCCAGCATCTTATGGGGGAAGATCTAGCAGTGTACCAGATAAATCCCAGCGCTCCCGCAGCATGTCTTTTAGTCCAGATCGTGTTCGTGTGCGGGGAAGGTCTCCAGCCTTCAATGCCTTGGCAGCTACCTTTGAGAACCCTAATGCCAGGAACCTTTCAACTCCACCCCCAATGGGTCGGAAACTGTATCCCAAATCTGTGACCCCAGATTCAGCCAAATCCGCACCCAAATCCGCAGCCATAGCAGCTCTTAGTTCTAGCTTTGAACAGCCACCTTCAGCTCGAGATAGTCTGATACCCCGGTCAATCAAAGTGAATCAGAGTCCAGAGGCTCCAAAACCTAAGCCTGAGACAAACAACAATAAGGAGAATTCCATGACCACCAGAATAGAATCTCAAACCATAACGGAAGATGTGAAAGAAGGTGAAGTTGAAGATGAGGAAGGTCTTTCAATTTACCCATATGAACGCCTCAAAATATCGTCTACAAATCCTGTAACAGACATTGATGTGACTAAGCGAGAGACTTATCTATCATCTGCCGAGTTCAAAGAGAAATTTGGGATGACTAAGGATACCTTTTACAAGTTGCCAAAATGGAAACAGAACAAATTCAAGATGGCCGTGCAGTTATTCTGA 2895 0.428 MAVSMRDLDSAFQGAGQKAGLEIWRIENFNPVPIPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHVEDEEYKIRMFVCKGKHVVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTHHDGKCEVAAIEDGKLMADPETGEFWGFFGGFAPLPRKPASDDDQHVDTYPPKLLSIEKGVAEPVKNESLTRELLDTNRCYILDCGLEVFVWMGRNTSLDERKSASGAADELVSGSDRQKSQIIRVIEGFETVMFKSKFDSWPETTEVTVSEDGRGKVAALLKRQGVNVRGLLKADPVKEEPQPYIDCTGNLQVWRVNGQEKILLPASDQSKLYCGDCYIFQYTYPGDDKEEYLIGTWIGKTSVEEERASAISLASKMVEILKFLPSQTRIYEGNEPLQFYTIFQSLIVFKGGLSNGYKNYIAEKEIPDDTYSEDGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGSTVFTWIGNLTTSDVQELVERMLDLIKPNLQSKPQKEGSESEQFWDLLGGKSEYPSQKIVRCAESDPHLFSCNFSKGNLKVSEIFNFSQDDLMTEDIFILYCHSEIFVWVGQQVDPKSRMQALTIGEKFLEHDFLLEKVSLDTPIYIVMEGSEPPFFTRFFTWESAKSAMLGNSFQRKLTIVKNGGTPTVDKPKRRTPASYGGRSSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAATFENPNARNLSTPPPMGRKLYPKSVTPDSAKSAPKSAAIAALSSSFEQPPSARDSLIPRSIKVNQSPEAPKPKPETNNNKENSMTTRIESQTITEDVKEGEVEDEEGLSIYPYERLKISSTNPVTDIDVTKRETYLSSAEFKEKFGMTKDTFYKLPKWKQNKFKMAVQLF 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01341 964 MobiDBLite consensus disorder prediction 738 782 - -
Accr8g01341 964 Gene3D Severin 386 520 IPR029006 -
Accr8g01341 964 FunFam Gelsolin 520 612 - -
Accr8g01341 964 Pfam Gelsolin repeat 267 337 IPR007123 -
Accr8g01341 964 Pfam Gelsolin repeat 150 216 IPR007123 -
Accr8g01341 964 Pfam Gelsolin repeat 28 111 IPR007123 -
Accr8g01341 964 Pfam Gelsolin repeat 639 712 IPR007123 -
Accr8g01341 964 CDD gelsolin_S5_like 517 608 - -
Accr8g01341 964 FunFam Villin-like 1 902 964 - -
Accr8g01341 964 Gene3D Severin 613 733 IPR029006 -
Accr8g01341 964 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Accr8g01341 964 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Accr8g01341 964 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Accr8g01341 964 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Accr8g01341 964 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Accr8g01341 964 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Accr8g01341 964 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Accr8g01341 964 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Accr8g01341 964 CDD gelsolin_S1_like 12 124 - -
Accr8g01341 964 SUPERFAMILY VHP, Villin headpiece domain 888 964 IPR036886 GO:0003779|GO:0007010
Accr8g01341 964 PANTHER VILLIN 8 954 IPR007122 GO:0051015
Accr8g01341 964 FunFam Villin-like 1 613 734 - -
Accr8g01341 964 SUPERFAMILY Actin depolymerizing proteins 10 147 - -
Accr8g01341 964 MobiDBLite consensus disorder prediction 856 878 - -
Accr8g01341 964 SUPERFAMILY Actin depolymerizing proteins 595 716 - -
Accr8g01341 964 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Accr8g01341 964 FunFam Villin-4 385 519 - -
Accr8g01341 964 FunFam Villin-like 1 132 247 - -
Accr8g01341 964 CDD gelsolin_S4_like 386 486 - -
Accr8g01341 964 MobiDBLite consensus disorder prediction 755 775 - -
Accr8g01341 964 Gene3D Severin 7 132 IPR029006 -
Accr8g01341 964 ProSiteProfiles Headpiece (HP) domain profile. 899 964 IPR003128 GO:0003779|GO:0007010
Accr8g01341 964 CDD gelsolin_S2_like 140 223 - -
Accr8g01341 964 Gene3D Severin 521 612 IPR029006 -
Accr8g01341 964 Pfam Villin headpiece domain 929 964 IPR003128 GO:0003779|GO:0007010
Accr8g01341 964 CDD gelsolin_S3_like 257 343 - -
Accr8g01341 964 MobiDBLite consensus disorder prediction 799 826 - -
Accr8g01341 964 FunFam Gelsolin 6 131 - -
Accr8g01341 964 Gene3D Severin 248 357 IPR029006 -
Accr8g01341 964 MobiDBLite consensus disorder prediction 864 878 - -
Accr8g01341 964 SUPERFAMILY Actin depolymerizing proteins 511 612 - -
Accr8g01341 964 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 254 427 IPR036180 -
Accr8g01341 964 CDD gelsolin_S6_like 621 718 - -
Accr8g01341 964 SMART VILL_6 252 344 IPR007122 GO:0051015
Accr8g01341 964 SMART VILL_6 519 606 IPR007122 GO:0051015
Accr8g01341 964 SMART VILL_6 19 117 IPR007122 GO:0051015
Accr8g01341 964 SMART VILL_6 392 489 IPR007122 GO:0051015
Accr8g01341 964 SMART VILL_6 137 234 IPR007122 GO:0051015
Accr8g01341 964 SMART VILL_6 622 719 IPR007122 GO:0051015
Accr8g01341 964 FunFam Villin-4 248 354 - -
Accr8g01341 964 SMART VHP_1 929 964 IPR003128 GO:0003779|GO:0007010
Accr8g01341 964 Gene3D Villin headpiece domain 887 964 IPR036886 GO:0003779|GO:0007010
Accr8g01341 964 Gene3D Severin 133 247 IPR029006 -
Accr8g01341 964 SUPERFAMILY Actin depolymerizing proteins 129 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01341 Accr-Chr8 33297780 33305690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01341 - - gmx:100809968 1622.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01341 8 33297780 33305690 Accr12g00968 12 10194879 10196583 CCT
Accr12g01186 12 13563367 13570409 Accr8g01341 8 33297780 33305690 CCT
Accr8g01341 8 33297780 33305690 Accr8g01341 8 33297780 33305690 ECH