Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01186 ATGTCTGTCTCCATGAGAGATTTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCTGGAATTGAAATATGGCGCATTGAGAATTTAAAACCAGTTGCTGTTCCCACCTCCTCCTATGGGAAGTTTTTCACTGGGGATTCCTACGTGATCTTGAAGACAACAGCTTCAAAAAGCGGCGCACTGCGTTATGATATCCATTACTGGCTGGGAAAAGACACCAGTCAGGATGAAGCTGGTGTTGCAGCCATCAAAACAATTGAGCTGGATGCAGCACTTGGAGGACGTGCTGTTCAGTATCGCGAATCACAGGGGCATGAAACCGAAAAGTTCTTGTCTTATTTCAGACCATGTATAATTCCTCAAGAAGGTGGAGTTGCCTCTGGTTTTAAACATGTTGAGGCTGAAGAACATACAACACGTTTGTATGCATGCCAGGGGAAACATGTTGTACGCGTCAAAGAGGTTCCTTTTGCAAGATCAACGCTCACCCATGATGATGTTTTTATTCTGGATACCCAGTCTAAAATATTTCAATTCAATGGTTCTAATTCATTTATTCAAGAAAGGGCTAAAGCATTGGAAGTTCTACAGTATATAAAGGATAACTACCATGATGGGAAATGTGATATTGCCTCTGTTGAGGATGGAAGGTTGATGGCTGATGCTGATGCTGGAGAATTTTGGGCTTTATTTGGTGGTTTCGCTCCTCTTCCACGGAAAACAGCCAGTGATGATGATAAAACTGTTGATTATCAGCCTCCAAAGCTGCTGTGTATTGTGAAGGGGAAGGCAGAACCTATTGAGAGTGATTCTTTGACAAGAGAACTACTAGACACAAACAAATGTTATATTCTTGATTGTGGTTTGGAAGTTTTTGTTTGGAAGGGAAGAAACACCTCTCTGGATGAAAGAAAAAGTGCAAGTGCAGCTGCAGAAGAATTAATCAGCAGCCCTGACAGAGCAAAATCCCACGTAGTTCGTGTGATTGAAGGATTTGAAACTGTGATGTTCAAGTCCAAATTTGATTCTTGGCCTCAAACACCTAATGTAACTGTGTCAGAAGATGGCCGTGGCAGGGTGGCAGCACTTCTACGGCGTCAAGGAGTGGATGTTAAGGGTCTGTTGAAAGCCGATCCAGTAAAAGAAGAACCTCAACCCCACATTGATTGCACAGGACGTTTGCAGGTTTGGAGGCTGAATGGCCAGGAAAAGACTCTCCTTCAAGAATCTGATCAATCAAAACTTTTTAGTGGTGATTGCTATGTCTTTCTCTACTCATATCCAGGAGAAGATAGAGAAGAGCATCTTGTAATAACATGGATTGGAAAGCACAGTGTTGAGGAAGAGAGAGCTTCAGCTATTTCAATGGCAAGCAAAATTGTTGAAACAATGAAGTTTATTCCTGCCCAGGCTCGAATTTATGAAGGGAATGAACCGATTCAGTTTTATTCTATCCTCCAAACCTTAATTGTTTACAAGGGTGGTCTTAGTGAAGGATATAAGAATTACATTAAGGAGAAGGAAATTCCAGATGATACTTACAAGGAAGATGGTATAGCACTGGTCCGCATCCAGGGCTCTGGACCTGAAAGTATGCAAGCTATACAAGTCGAACCGGTTGCTTCCTCCTTGAATTCCTCATATTGCTACATACTTCATGATGGGCCCACAGCCTTCACTTGGCTAGGGAGCCTTACAAACACAGATGACCATGAACTAGTTGAGAGGATGCTGGATTTGATAAAGCCGGAATTACAAACCAAACAACATAAGGAAGGTTCAGAGTCTGAACAGTTTTGGGATTTGTTAGGCGGAAAATTAGAATATCCTAGTCAAAAGATTGTGAGGGATGCTGAAAGAGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGAAAATTTGAAGGTGACAGAAGTATACAACTTCTCCCAGGATGATTTAATGACTGAAGATATAATGATCTTGAATTGTCACTCGGATATCTTTGTCTGGGTTGGTCAGCAAATTGACCTCAAGAGTAGAACAAATGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATTTTTGTTTGGAAAATTTATCTCGTGAAGCTCCAATATTTGTTATCATTGAAGGGAGTGAACCAACTTTTTTCACTCGCTTCTTCAAATGGGAGTCTGCAAAATCTGCGATGCTGGGAAACTCATTTCAAAGGAGGCTTACAATACTGAAAAATGGGGGCAGTGCCCCTTTGGATAGACCAAAACGGAGAACAACAGTATCATATGGAGGAAGGTCCAGTGGTGCACCGGAAAAACCGCAACGTTCTCGCAGTGTGTGCGCTACACCAGACCGTGCTCGTGTGAGAGGCAGGTCACCAGCCTTTAATGCATTAGCAGCTACATTTGAAGGCCCCAAGGACAGAAACCTTTCAACTCCACCTCCTATGATCAGGAAGCTGTATGCAAAATCTCTGACCCCAGATTCAGCAAAATTGGCACCCAAATCTACAGCTATAGCTTCTCTTACTTCAAGTTTTGAATCATCCCGCCCATCAAAAGAAAATCTTATACCTCGATCATTCAGAGTGAACCGGGAGGCCTCGAACCCGGAGACAAGTAAAGAGAGAGACTCTATGAGTTGTATAGAAGAAGGTGTGAAAGAGGGTGAAGCTGATGAGGAAGAAGGTCTCCCAGTTTATCCATATGAACGCCTCAAAATAGGATCTGATGATCCTGTAACAGAGATTGATGTGACCAGGAGAGAGGCTTATATGTCAGCTGAGGAGTTCAAAGAGAAGTTTGGGATGACAAAAAAGGATCTCTACAAGTTGCCCAGATGGAAACAGAACAAACTCAAGATGGCCATTCACTTATTTTAA 2862 0.4242 MSVSMRDLDPAFQGAGQKAGIEIWRIENLKPVAVPTSSYGKFFTGDSYVILKTTASKSGALRYDIHYWLGKDTSQDEAGVAAIKTIELDAALGGRAVQYRESQGHETEKFLSYFRPCIIPQEGGVASGFKHVEAEEHTTRLYACQGKHVVRVKEVPFARSTLTHDDVFILDTQSKIFQFNGSNSFIQERAKALEVLQYIKDNYHDGKCDIASVEDGRLMADADAGEFWALFGGFAPLPRKTASDDDKTVDYQPPKLLCIVKGKAEPIESDSLTRELLDTNKCYILDCGLEVFVWKGRNTSLDERKSASAAAEELISSPDRAKSHVVRVIEGFETVMFKSKFDSWPQTPNVTVSEDGRGRVAALLRRQGVDVKGLLKADPVKEEPQPHIDCTGRLQVWRLNGQEKTLLQESDQSKLFSGDCYVFLYSYPGEDREEHLVITWIGKHSVEEERASAISMASKIVETMKFIPAQARIYEGNEPIQFYSILQTLIVYKGGLSEGYKNYIKEKEIPDDTYKEDGIALVRIQGSGPESMQAIQVEPVASSLNSSYCYILHDGPTAFTWLGSLTNTDDHELVERMLDLIKPELQTKQHKEGSESEQFWDLLGGKLEYPSQKIVRDAERDPHLFSCNFSKENLKVTEVYNFSQDDLMTEDIMILNCHSDIFVWVGQQIDLKSRTNALTIGEKFLEHDFCLENLSREAPIFVIIEGSEPTFFTRFFKWESAKSAMLGNSFQRRLTILKNGGSAPLDRPKRRTTVSYGGRSSGAPEKPQRSRSVCATPDRARVRGRSPAFNALAATFEGPKDRNLSTPPPMIRKLYAKSLTPDSAKLAPKSTAIASLTSSFESSRPSKENLIPRSFRVNREASNPETSKERDSMSCIEEGVKEGEADEEEGLPVYPYERLKIGSDDPVTEIDVTRREAYMSAEEFKEKFGMTKKDLYKLPRWKQNKLKMAIHLF 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01186 953 FunFam Gelsolin 520 612 - -
Accr12g01186 953 FunFam Villin-4 248 354 - -
Accr12g01186 953 CDD gelsolin_S3_like 261 343 - -
Accr12g01186 953 Gene3D Severin 522 613 IPR029006 -
Accr12g01186 953 Gene3D Severin 7 132 IPR029006 -
Accr12g01186 953 CDD gelsolin_S2_like 139 232 - -
Accr12g01186 953 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Accr12g01186 953 Gene3D Villin headpiece domain 891 953 IPR036886 GO:0003779|GO:0007010
Accr12g01186 953 SMART VILL_6 19 117 IPR007122 GO:0051015
Accr12g01186 953 SMART VILL_6 517 606 IPR007122 GO:0051015
Accr12g01186 953 SMART VILL_6 137 234 IPR007122 GO:0051015
Accr12g01186 953 SMART VILL_6 254 344 IPR007122 GO:0051015
Accr12g01186 953 SMART VILL_6 392 489 IPR007122 GO:0051015
Accr12g01186 953 SMART VILL_6 620 719 IPR007122 GO:0051015
Accr12g01186 953 SUPERFAMILY VHP, Villin headpiece domain 884 953 IPR036886 GO:0003779|GO:0007010
Accr12g01186 953 CDD gelsolin_S1_like 12 124 - -
Accr12g01186 953 CDD gelsolin_S5_like 517 606 - -
Accr12g01186 953 PANTHER VILLIN 6 943 IPR007122 GO:0051015
Accr12g01186 953 SUPERFAMILY Actin depolymerizing proteins 511 612 - -
Accr12g01186 953 SUPERFAMILY Actin depolymerizing proteins 382 527 - -
Accr12g01186 953 SUPERFAMILY Actin depolymerizing proteins 224 349 - -
Accr12g01186 953 MobiDBLite consensus disorder prediction 740 773 - -
Accr12g01186 953 Pfam Villin headpiece domain 918 953 IPR003128 GO:0003779|GO:0007010
Accr12g01186 953 Gene3D Severin 133 246 IPR029006 -
Accr12g01186 953 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Accr12g01186 953 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Accr12g01186 953 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Accr12g01186 953 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Accr12g01186 953 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Accr12g01186 953 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Accr12g01186 953 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Accr12g01186 953 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Accr12g01186 953 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Accr12g01186 953 FunFam Villin-like 1 613 734 - -
Accr12g01186 953 SUPERFAMILY Actin depolymerizing proteins 135 240 - -
Accr12g01186 953 Gene3D Severin 247 355 IPR029006 -
Accr12g01186 953 Gene3D Severin 380 521 IPR029006 -
Accr12g01186 953 Pfam Gelsolin repeat 149 210 IPR007123 -
Accr12g01186 953 Pfam Gelsolin repeat 269 337 IPR007123 -
Accr12g01186 953 Pfam Gelsolin repeat 30 111 IPR007123 -
Accr12g01186 953 Pfam Gelsolin repeat 637 709 IPR007123 -
Accr12g01186 953 FunFam Villin-like 1 132 247 - -
Accr12g01186 953 FunFam Gelsolin 6 131 - -
Accr12g01186 953 CDD gelsolin_S6_like 621 718 - -
Accr12g01186 953 FunFam Villin-4 385 519 - -
Accr12g01186 953 CDD gelsolin_S4_like 388 485 - -
Accr12g01186 953 Gene3D Severin 615 732 IPR029006 -
Accr12g01186 953 ProSiteProfiles Headpiece (HP) domain profile. 888 953 IPR003128 GO:0003779|GO:0007010
Accr12g01186 953 SMART VHP_1 918 953 IPR003128 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01186 Accr-Chr12 13563367 13570409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01186 - - zju:107403659 1497.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g01186 12 13563367 13570409 Accr8g01341 8 33297780 33305690 CCT