Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00206 ATGGTGTTTCTTTGTGGTGGTAAGAGAGTGAAAGCGAGCAAAGGCATGAAGGCGACGCTGAGATACTTAGCAGGAATGGCTGGGCCTAGTGGTTATGGCTCTAATTCAACAGCCGAGCAAGTCACTGAAGATTGCTTTCTTTCTTCCCATCTAACTGCCCTCATCACAGGTGGGACTTCTGGGATTGGAGCTGAAACAGCAAGAGTATTGGCTAAGAGAGGAGTGAGAGTAGTGATTGGAGCGAGAGACTTGAAGAAGGCGAGAGAAGTGAGACACAATATACAGAAAGAAACTCCAAAGGCAGAGATTATAGTGTTGGAAATCGATCTCAGTTCTTTTGCTTCTGTACAGAGATTTTGTTCTGAGTTTTTGGCTCTACAACTTCCTCTCAATATCCTCATAAACAATGCTGGAATATTCTCTCAGAACTTGGAGTTCTCCGAAGAGAAAATTGAGCTGACGTTTGCCACCAACTACTTGGGACATTTTTTGTTGACAGAAATGCTGATAGAGAAAATGATAGAAACAGCAGAGAAGAGTGGGATTGAAGGAAGGATCATAAATGTGTCTTCTGTGATCCATAGCTGGGTCAAGAGAGATGCTTTTCATTTCCACCACTTGCTTAATGGAACAAAATATAATGGCACGCGAGCATATGCACAATCAAAATTGGCCAATATTTTGCATGTCAAGGAATTGGCTAGACAACTTAAGGCAAGGAATGCAAAAGTAACAGTGAATGCAGTTCATCCGGGGATTGTGAAGACTGGAATTATCAGAGCTCATAAAGGCCTCATAACAGATTCCCTGTTCTTCATCGCATCCAAGTTGCTCAAATCAACATCTCAGGGAGCAGCAACAACGTGTTATGTTGCAGTGAGTGCAAAAACACAAGGGCTAAGTGGGAAATACTTCGCGGATTGTAATGAGGGTAACTGCTCAAGTTTAGCAAACGACGAATTTGAAGCTCAGAAGCTATGGAACAATACTCAAGCTTTGATTCATAAACGACTGCGTCAAGCCTCCTCTTAA 1032 0.4254 MVFLCGGKRVKASKGMKATLRYLAGMAGPSGYGSNSTAEQVTEDCFLSSHLTALITGGTSGIGAETARVLAKRGVRVVIGARDLKKAREVRHNIQKETPKAEIIVLEIDLSSFASVQRFCSEFLALQLPLNILINNAGIFSQNLEFSEEKIELTFATNYLGHFLLTEMLIEKMIETAEKSGIEGRIINVSSVIHSWVKRDAFHFHHLLNGTKYNGTRAYAQSKLANILHVKELARQLKARNAKVTVNAVHPGIVKTGIIRAHKGLITDSLFFIASKLLKSTSQGAATTCYVAVSAKTQGLSGKYFADCNEGNCSSLANDEFEAQKLWNNTQALIHKRLRQASS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00206 343 PRINTS Glucose/ribitol dehydrogenase family signature 52 69 IPR002347 -
Accr8g00206 343 PRINTS Glucose/ribitol dehydrogenase family signature 128 139 IPR002347 -
Accr8g00206 343 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
Accr8g00206 343 PRINTS Glucose/ribitol dehydrogenase family signature 178 194 IPR002347 -
Accr8g00206 343 PRINTS Glucose/ribitol dehydrogenase family signature 219 238 IPR002347 -
Accr8g00206 343 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 192 IPR002347 -
Accr8g00206 343 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 139 IPR002347 -
Accr8g00206 343 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 219 238 IPR002347 -
Accr8g00206 343 PANTHER RETINOL DEHYDROGENASE 29 334 - -
Accr8g00206 343 CDD retinol-DH_like_SDR_c_like 52 327 - -
Accr8g00206 343 Gene3D - 40 339 - -
Accr8g00206 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 309 IPR036291 -
Accr8g00206 343 Pfam short chain dehydrogenase 52 193 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00206 Accr-Chr8 2800268 2803699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00206 30 258 Acyl Lipid Metabolism Gene Families AT1G63380 28.632 1.03e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00206 - - pcin:129309518 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00206 8 2800268 2803699 Accr12g00520 12 4858076 4860815 CCT
Accr8g00206 8 2800268 2803699 Accr8g00206 8 2800268 2803699 ECH