Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00177 ATGCTAAGGCTCGCTTCCAAGAGACTTATCGGAATCGCGTCGCGGCCGGCGCCGACGTCCCAGCTTCTGCCTCGGTTTTACCACGAGAGGGTTGTTGATCACTACAACAATCCCCGGAATGTTGGATCCTTTGAGAAGAATGACCCCAACGTCGGTACGGGGTTGGTCGGTGCACCTGCTTGTGGCGATGTTATGAAGCTTCAGATTAAGGTTGATGAAGAGACCGGTAAGATTGTTGATGCTCGCTTCAAGACCTTCGGCTGTGGCTCTGCTATTGCCTCTTCCTCTCTAGCTACTGAATGGGTAAAGGGAAAGAAAACGGAAGAAGCTCTTTCCATTAAAAACTCTGAAATTGCAAAGCATCTTTCACTCCCGCCGGTTAAGCTTCACTGCAGCATGCTCGCTGAGGATGCCATTAAAGCAGCTGTGAAAGACTATGAAACTAGGCGTGCTAATGGAAATGGTAGTGAAGATTTAGCTTCTGGAATGAAGGCTGCTCCTGCTTGA 507 0.4931 MLRLASKRLIGIASRPAPTSQLLPRFYHERVVDHYNNPRNVGSFEKNDPNVGTGLVGAPACGDVMKLQIKVDEETGKIVDARFKTFGCGSAIASSSLATEWVKGKKTEEALSIKNSEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYETRRANGNGSEDLASGMKAAPA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00177 168 FunFam Iron-sulfur cluster assembly scaffold protein IscU 25 153 - -
Accr8g00177 168 NCBIfam Fe-S cluster assembly scaffold IscU 27 150 IPR011339 GO:0005506|GO:0016226|GO:0051536
Accr8g00177 168 Gene3D - 26 165 - -
Accr8g00177 168 SUPERFAMILY SufE/NifU 26 151 - -
Accr8g00177 168 Pfam NifU-like N terminal domain 27 151 IPR002871 GO:0005506|GO:0016226|GO:0051536
Accr8g00177 168 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 15 156 IPR002871 GO:0005506|GO:0016226|GO:0051536
Accr8g00177 168 CDD IscU_like 27 142 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00177 Accr-Chr8 2504767 2506243 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00177 K22068 - cave:132176487 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00177 8 2504767 2506243 Accr12g00545 12 5101189 5103732 CCT