Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00166 ATGCCGGGAATGGCTGATAATGGAGTTACTGATGAGAGGGAGGCAAATGAGAGGAATATAAATCCTTCCTCTTCTAACTCTAAGGAGGCCTCGACCTCAATTGAGTCACAACATCCTGAGAGTACAGGTGTTGCTGGTGCTGTTGAGACCTCTATTGACCAGCTTTATGAAAATGTGTATGACATGCAAAGTTCTGATCAGTCACCTTCGAGGCAAAGTTTTGGATCTGGTGGTGATGAATCTAGGATTGATTCAGAATTGCATAATCTAGTTGGAGGGCAAATGAGGGAGGTGGAGATAATGGAAGAGGAAATGGAGGAAAAGCAAGGTGGTGATGGAATTAGTGAAACATCTTCTAGAAAGGGTAGTTTGTCAAATGATAGGAAGATGGCTCATGTGGATGAGATTCAACCTGCAAGTACAAGTTCTGTCACTTCTGAAAAACCAAACAAGCCATCCAATGCAAAATTACAATCCAAGACATCAGTAAAATCAAAACCCAATGTCAAAAGTCCTCTTGTGAAGCCTTCTTTTGAGAAAAAGAACGATAAGCCTTTGAAAAAACAAAGCACGGGAGTTGTTAGCTCGAAGAAATCACAAATCGCTCCTCCTGGAAGGTCATTGCCACAGAGTCGTGCCAAGAATTTAGCTGAACCACCATCAGATAAGCCGGAGATGGGACCAATTTTGCTTAAGCAGGCAGCGGATCAGATGTCATCAGGGGATAATCCACATAAGGCTCTTGAATTAGCTCTTCAAGCTACCGAAGTGTTTGAGAAGTATGCTGGTGAGAAACCAAGTTTGGAGCTTGTTATGAGCTTACATGTTGCAGCAGCAATATACTGTAGCTTGGGTCAATACAATGACGCGATTCCAGTTCTCCTGCGCTCTATTGCGATTCCTGATATTGAGGAAGGGGAGGACCATGCACTGGGTAAATTTGCTGGTCTGATGCAACTGGGTGACACCTATGCAATGCTGGGCCAGCTTGAGAATGCAGTTACGTACTACACCAAAGGTTTGGAAGTCCAGAAACAGATTTTGGGAGAAACAGATCAGAGAGTTGGTGAAACTTGTCGGTATCTGGCTGAAGCTCATGTTCAAGCATTGCAGTTTGATGAGGCTGAGAGGCTCTGCCAAATGGCTTTGGACATTCATAAAGCCAGAGATTCGCCTCCTTCTCTTGAAGAGGCAGCTGATAGGAGGCTCATGGGCCTTATATGTGAAACAAAGGGAAAGCATGAAGCAGCACTAGAGCATCTTGTCTTAGCAAGCATGGCAATGGTAGCAAATGGACAAGAAGGGGAAGTGGCATCTGTTGATTGTAGTATTGGAGACACGTATCTATCCTTGTCTCGATATGATGAAGCTGTTTTCGCTTATCAAAAAGCACTAACAGCCTTCAAGGCCAGCAAAGGAGAGAACCATCCAGCGGTGGCTTTGGTTTTTGTACGTTTAGCTGACTTGTATAAGAGGACAGGGAAGATAAAGGAATCCAAATCTTACTGTGAGAGTGCACTTAAAATCTATGAGCAGCCTCTTCCCGGGGTCCTTCTCGAGGATATTGCAAGTGGTCTCACTGATGTTGCTGCTATCTACGAGTCAACGAATGAACATGAACAGGCACTCAATTTACTGAAGAAGGCATTGGGTATATATAACAATGCCCCTGGTCAGCAAAGCACAATAGCAGGAATTGAAGCTCAGATGGGGGTATTGTACTACATTGTAGGGGACTATACAGAATCTTACAATGCATTTAAGAATGGTATCACAAAACTTCGTGCTATGGGGGAGAAGAAATCAGCCTTCTTTGGCATTGCTCTTAATCAAATGGGACTTTCCTGTGTGCAGCGTTACGCCCTCAGTGAGGCTGCAGAATTGTTTGAAGAGTCCAAGAGTATTTTGGAACAAGAGTATGGACCATATCATCCTGAAACACTTGGCGTATGTAGTAATCTTGCCGGCACATATGATGCACTGGGAAGGTTGGATGATGCAATTGAAATTCTGGAGTACGTTGTTAGTTTACGGGAGGAAAAACTTGGGACTGCAAATCCTGATGTTTATGATGAGAAGAGAAGGTTGAGTGAATTGTTGAAGGAAGCAGGCAGAGTTCGGAACAGAAAATCAGTATCACTGGAGCGCCTTCTTGATTCCAATGTTTATGCTCTAAACAATTTTGTCATGAGGATGGCTAGCTAG 2205 0.4372 MPGMADNGVTDEREANERNINPSSSNSKEASTSIESQHPESTGVAGAVETSIDQLYENVYDMQSSDQSPSRQSFGSGGDESRIDSELHNLVGGQMREVEIMEEEMEEKQGGDGISETSSRKGSLSNDRKMAHVDEIQPASTSSVTSEKPNKPSNAKLQSKTSVKSKPNVKSPLVKPSFEKKNDKPLKKQSTGVVSSKKSQIAPPGRSLPQSRAKNLAEPPSDKPEMGPILLKQAADQMSSGDNPHKALELALQATEVFEKYAGEKPSLELVMSLHVAAAIYCSLGQYNDAIPVLLRSIAIPDIEEGEDHALGKFAGLMQLGDTYAMLGQLENAVTYYTKGLEVQKQILGETDQRVGETCRYLAEAHVQALQFDEAERLCQMALDIHKARDSPPSLEEAADRRLMGLICETKGKHEAALEHLVLASMAMVANGQEGEVASVDCSIGDTYLSLSRYDEAVFAYQKALTAFKASKGENHPAVALVFVRLADLYKRTGKIKESKSYCESALKIYEQPLPGVLLEDIASGLTDVAAIYESTNEHEQALNLLKKALGIYNNAPGQQSTIAGIEAQMGVLYYIVGDYTESYNAFKNGITKLRAMGEKKSAFFGIALNQMGLSCVQRYALSEAAELFEESKSILEQEYGPYHPETLGVCSNLAGTYDALGRLDDAIEILEYVVSLREEKLGTANPDVYDEKRRLSELLKEAGRVRNRKSVSLERLLDSNVYALNNFVMRMAS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00166 734 Gene3D Tetratricopeptide repeat domain 222 314 IPR011990 GO:0005515
Accr8g00166 734 MobiDBLite consensus disorder prediction 56 79 - -
Accr8g00166 734 ProSiteProfiles TPR repeat profile. 314 347 IPR019734 GO:0005515
Accr8g00166 734 MobiDBLite consensus disorder prediction 136 168 - -
Accr8g00166 734 Pfam Tetratricopeptide repeat 437 512 - -
Accr8g00166 734 Pfam Tetratricopeptide repeat 607 679 - -
Accr8g00166 734 Pfam Tetratricopeptide repeat 317 387 - -
Accr8g00166 734 SUPERFAMILY TPR-like 436 555 IPR011990 GO:0005515
Accr8g00166 734 MobiDBLite consensus disorder prediction 19 48 - -
Accr8g00166 734 MobiDBLite consensus disorder prediction 188 206 - -
Accr8g00166 734 Gene3D Tetratricopeptide repeat domain 601 718 IPR011990 GO:0005515
Accr8g00166 734 ProSiteProfiles TPR repeat profile. 438 471 IPR019734 GO:0005515
Accr8g00166 734 SMART tpr_5 564 597 IPR019734 GO:0005515
Accr8g00166 734 SMART tpr_5 271 304 IPR019734 GO:0005515
Accr8g00166 734 SMART tpr_5 648 681 IPR019734 GO:0005515
Accr8g00166 734 SMART tpr_5 523 556 IPR019734 GO:0005515
Accr8g00166 734 SMART tpr_5 606 639 IPR019734 GO:0005515
Accr8g00166 734 SMART tpr_5 314 347 IPR019734 GO:0005515
Accr8g00166 734 SMART tpr_5 438 471 IPR019734 GO:0005515
Accr8g00166 734 SMART tpr_5 480 513 IPR019734 GO:0005515
Accr8g00166 734 SMART tpr_5 356 389 IPR019734 GO:0005515
Accr8g00166 734 SUPERFAMILY TPR-like 563 706 IPR011990 GO:0005515
Accr8g00166 734 Gene3D Tetratricopeptide repeat domain 425 600 IPR011990 GO:0005515
Accr8g00166 734 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 36 721 - -
Accr8g00166 734 SUPERFAMILY TPR-like 269 419 IPR011990 GO:0005515
Accr8g00166 734 Gene3D Tetratricopeptide repeat domain 315 424 IPR011990 GO:0005515
Accr8g00166 734 MobiDBLite consensus disorder prediction 97 114 - -
Accr8g00166 734 MobiDBLite consensus disorder prediction 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00166 Accr-Chr8 2354056 2356639 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00166 - - gmx:100783201 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00166 8 2354056 2356639 Accr12g00563 12 5310276 5312830 CCT
Accr8g00166 8 2354056 2356639 Accr12g00563 12 5310276 5312830 ECH
Accr8g00166 8 2354056 2356639 Accr8g00166 8 2354056 2356639 ECH