Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00563 ATGCCAGGAATCCTTACAAATGAATTTGAACATAATGAAAGAGCAAATGAGATGAACGGAAATCCTTCCCCTTGTAAGGAATCTGCCACTCCAATCAAGCCCCAAAAGAGTTCCTTTAACCCGCAAAGTCCTCAGAACACAGGTCCAGATGTACCTGCCTTACCGGTTGACACCTCAATCGAGCAGCTTTATGAAAATGTCTGTGACATGGAAAGTTCTGATCACTCACCTTCCAGACAAAGTCTCGGATCCGATGGCGATGAGTCTAGGATCGATTCAGAATTGTGCCATCTAGTTGGAGGACCAATGAGGGAAGTGGAAATCATGGAAGAGGAAGTGGCAGAGAGTTCGAGAGGTGATTCCATTAGTGAAACATCTTCTAGAAAAGAAACATCAGTGAATGGTGAGAAGCTGGAACTGGCAGATGAGAACATTCAACATGAGAAGTTGGTGCTGGCCGATGAGAAGATTCAATCTGAGAAGTTGGTACAGGAGGATGAGAAGATTCAGTCTGAGAAGTTGGTACAGGCGGATGAGAAGGTTCAATCTGCTAGTACAAGTTCTGCTTCTTCAGAAAATTCAAATAAAGTATCAAACTCACAGGTGGACCGAATCCCTGAAACACCACCAGAGTCAAAACCCAAGGGAAAAAGTCCTCCCACAAAGCCTCCCACTGATAAGAGGAACGATAAACCTCGGAGAAAACAAAATAATGGAGCAGCTCGTGGGAAAAAATCGAAGAATTCTCCTATTAGAAGGTTAAAGTCACAAAATCAGCGTGAGAATTCCACTGAATCTACATCAGACAAGCCGGAGATGGGGCCAGTTTTACTCAAGCAAGCAAGAGATATGATTTCAACAGGAGAAAATCCAAGGCTGGCTCTTGAATTAGCTCTTCGAGCAATGAGATTGTTTGAGAAGTATGCTGATGGAAAACCAAGTTTGGAACTGGTTATGTGCCTGCATGTTACCGCGGCAATATATTCCGGCTTGGGCCAGTACCATGAAGCAATCCCACTTCTTGAGCACTCCATCGGAATTCCTCTCATTGAGGAAGGCCAAGATCACGCCCTCGCCAAGTTTGCTGGTCACATGCAATTAGGTGACACCTATGCAATGTTGGGCCAGCTTGAAAATTCGATTGCGTGCTACACCACAGGGTTGGAAGTCCAGAGGCAAGTCTTAGGAGAAACAGACCCGAGATTTGGTGAAACTTGCAGATATGTGGCTGAAGCACACGTTCAGGCGTTGCAATTTGATGAAGCTGAGAGGCTCTGCCAAATGGCTCTTGACATTCATAGAGCAAATGGTTCGCCTCCTTCCCTTGAAGAGGCGGCTGATAGGAGGCTCATGGGACTCATATGTGAAACAAAAGGAAACCATGAAGCAGCTCTTGAGCATCTAATTTTAGCCAGCATGGCAATGGTGGCTAATGGCCAGGAAGTTGAAGTGGCATCTGTTGACAGCAGCATTGGAGACACATACTTATCTTTGTCCCGGTACGATGAAGCTATTTTTGCATATCAGAAAGCACTGACAGTTTTTAAGACCAGCAAAGGAGAGAATCATCCGGCCGTGGGATCAATCTTTGTACGCTTGGCTGACTTGTATAACAGGACAGGGAAGATAAGGGAATCAAAATCTTACTGCGAGAGTGCACTTAGAATCTATGAGAAACCTATGCCTGGGGTCCCTCCTGAGGAGATTGCAAGTGGTCTTATGGATATTTCAGCTATCTATGAGTCAATGAATGAGCTTGACCAGCCACTCAAGTTACTTCCCAGGGCACTGGAGATATATAAGGATGCCCCTGGTCGGCAAAACACGGTAGCAGGAATTGAAGCTCAGATGGGAGTATTGCACTACATGTTGGGAAACTACTCTGAATCTTACAACACTCTGAAGAATGCCATCTCAAAGCTTCGTGCTGCCGGAGAGAAGAAAACAGCTTTCTTTGCCATCGCTCTTAACCAAATGGGACTTGCTTGTGTGCAGCGCTATGCATTAGGTGAGGCCACGGAACTGTTTGAAGAAGCAAAGAATATAATGGAACAAGAATATGGACCCTATCACCATGAAACGCTAGGGGTGTATAGCAATCTTGCTGGCACCTATGATGCAATAGGCAGGGTGGATGAGGCAATTCAGATTCTGGAGTATGTAGTGGGAATGAGAGAGGAAAAACTTGGGACAGCGAATCCTGATGTGGATGACGAGAAAAGAAGGTTGAGTGAATTGTTGAAGGAAGCTGGTAGAGTTAGGAGCAGAGCAGCCAGATCACTTGAGAACCTTCTTGATGCTAATGCTCCTTCTCAAAACAAAATAACTTAG 2331 0.4522 MPGILTNEFEHNERANEMNGNPSPCKESATPIKPQKSSFNPQSPQNTGPDVPALPVDTSIEQLYENVCDMESSDHSPSRQSLGSDGDESRIDSELCHLVGGPMREVEIMEEEVAESSRGDSISETSSRKETSVNGEKLELADENIQHEKLVLADEKIQSEKLVQEDEKIQSEKLVQADEKVQSASTSSASSENSNKVSNSQVDRIPETPPESKPKGKSPPTKPPTDKRNDKPRRKQNNGAARGKKSKNSPIRRLKSQNQRENSTESTSDKPEMGPVLLKQARDMISTGENPRLALELALRAMRLFEKYADGKPSLELVMCLHVTAAIYSGLGQYHEAIPLLEHSIGIPLIEEGQDHALAKFAGHMQLGDTYAMLGQLENSIACYTTGLEVQRQVLGETDPRFGETCRYVAEAHVQALQFDEAERLCQMALDIHRANGSPPSLEEAADRRLMGLICETKGNHEAALEHLILASMAMVANGQEVEVASVDSSIGDTYLSLSRYDEAIFAYQKALTVFKTSKGENHPAVGSIFVRLADLYNRTGKIRESKSYCESALRIYEKPMPGVPPEEIASGLMDISAIYESMNELDQPLKLLPRALEIYKDAPGRQNTVAGIEAQMGVLHYMLGNYSESYNTLKNAISKLRAAGEKKTAFFAIALNQMGLACVQRYALGEATELFEEAKNIMEQEYGPYHHETLGVYSNLAGTYDAIGRVDEAIQILEYVVGMREEKLGTANPDVDDEKRRLSELLKEAGRVRSRAARSLENLLDANAPSQNKIT 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00563 776 MobiDBLite consensus disorder prediction 111 175 - -
Accr12g00563 776 MobiDBLite consensus disorder prediction 16 49 - -
Accr12g00563 776 MobiDBLite consensus disorder prediction 176 206 - -
Accr12g00563 776 SUPERFAMILY TPR-like 611 752 IPR011990 GO:0005515
Accr12g00563 776 MobiDBLite consensus disorder prediction 65 84 - -
Accr12g00563 776 ProSiteProfiles TPR repeat profile. 485 518 IPR019734 GO:0005515
Accr12g00563 776 MobiDBLite consensus disorder prediction 252 270 - -
Accr12g00563 776 Gene3D Tetratricopeptide repeat domain 279 470 IPR011990 GO:0005515
Accr12g00563 776 Coils Coil 736 756 - -
Accr12g00563 776 SMART tpr_5 611 644 IPR019734 GO:0005515
Accr12g00563 776 SMART tpr_5 361 394 IPR019734 GO:0005515
Accr12g00563 776 SMART tpr_5 403 436 IPR019734 GO:0005515
Accr12g00563 776 SMART tpr_5 695 728 IPR019734 GO:0005515
Accr12g00563 776 SMART tpr_5 653 686 IPR019734 GO:0005515
Accr12g00563 776 SMART tpr_5 527 560 IPR019734 GO:0005515
Accr12g00563 776 SMART tpr_5 445 478 IPR019734 GO:0005515
Accr12g00563 776 SMART tpr_5 485 518 IPR019734 GO:0005515
Accr12g00563 776 MobiDBLite consensus disorder prediction 1 95 - -
Accr12g00563 776 Pfam Tetratricopeptide repeat 653 721 - -
Accr12g00563 776 Pfam Tetratricopeptide repeat 484 559 - -
Accr12g00563 776 SUPERFAMILY TPR-like 289 434 IPR011990 GO:0005515
Accr12g00563 776 MobiDBLite consensus disorder prediction 111 275 - -
Accr12g00563 776 Pfam Tetratricopeptide repeat 365 392 IPR019734 GO:0005515
Accr12g00563 776 Gene3D Tetratricopeptide repeat domain 646 767 IPR011990 GO:0005515
Accr12g00563 776 Gene3D Tetratricopeptide repeat domain 471 645 IPR011990 GO:0005515
Accr12g00563 776 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 51 768 - -
Accr12g00563 776 MobiDBLite consensus disorder prediction 220 237 - -
Accr12g00563 776 SUPERFAMILY TPR-like 404 561 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00563 Accr-Chr12 5310276 5312830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00563 - - pcin:129319228 1283.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00166 8 2354056 2356639 Accr12g00563 12 5310276 5312830 CCT
Accr8g00166 8 2354056 2356639 Accr12g00563 12 5310276 5312830 ECH
Accr12g00563 12 5310276 5312830 Accr12g00563 12 5310276 5312830 ECH