Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00629 ATGAACGGTGGCGATGAGGTCGTCGCAGCTCCGGCGGGTCCACCGCAGCCGCTGGAGTGGAAATTTTCGCAGGTTTTTGGTGAACGTACGGCCGGGGAGGAAGTTCAGGAAGTGGATATAATTTCTGCCATTGAATTTGACAAGTCTGGTAATCATCTTGCTACTGGTGATCGTGGTGGTCGAGTAGTTCTATTTGAGAGGACAGATGCGAAAGATCATGGAGGATCAAGAAGGGATTTGGAAAGTGTGGATTATACAATAAGTAGGCATCCTGAGTTCCGATATAAAACCGAGTTTCAGAGTCATGAACCTGAGTTCGATTACCTAAAGAGCTTGGAAATTGAAGAGAAAATAAACAAAATCAGATGGTGCCAAACAGCTAATGGTGCCTTGTTTCTTCTATCTACAAATGATAAAACCATCAAATATTGGAAGGTTCAAGAAAAGAAGGTCAAGAAAATATCTGAGATGAATGTTGACCCATCAAAAGCAATAGCGAATGGCTGTATCAGCAGTATTGCTAGTTCAAGTAATTCGAGTAGCCCTAGGCCATCATATCTTGCCAATGGAGGATCTCCCGATAAATCATACAGCTATCTGACCAATGACTTCCCCTTTCCACCTGGGGGCATCCCATCGTTAAGATTACCTGTGGTAGTAACCAGCCATGAGACGAGCCTCATAGCTCGATGTCGTAGAGTATACGCCCATGCTCATGATTATCATATCAACTCTATATCAAGTAACAGTGATGGCGAAACTTTCATATCTGCTGATGATTTGCGGATAAATCTGTGGAACCTAGAAATTAGCAATCAAAGTTTTAATATTGTAGATGTAAAGCCTGCAAACATGGAGGATCTGACTGAGGTTATAACATCTGCCGAGTTTCACCCTACCCATTGTAATATGTTGGCCTATAGCAGTTCAAAGGGTTCAATTCGTCTTGTTGATCTGCGGCAATCAGCATTGTGTGATACTCATGCCAAATTGTTTGAGGAACAGGAGGCCCCAGGGTCCAGGTCATTTTTTACGGAGATTATTGCTTCAATTTCAGATATAAAATTCGGGAAGGATGGAAGATATGTTCTTAGTCGTGATTACATGACTCTAAAGTTGTGGGACATTAATATGGATTCTGGCCCAGTTGCGACTTTCCAGGTTCATGAATATCTAAGACCTAAGCTATGTGATTTATATGAAAATGATTCAATTTTTGACAAGTTCGAGTGTTGCTTGAGTGGCGATGGGTCACGTGTAGCAACTGGTTCTTACAGCAACCTATTCCGTGTGTTTGGCTGCACCCCAGGAAGTGCTGAGGCTACAACCTTGGAAGCCAGTAAAAATCCAATGAGGCGACAAGTTCAGACCCCTGCAAGGCCAGCTAGATCACTGGGAAGTAGTTTAACTCGAGTTGTAAGGCGAGGAGCCGATAGTCCGGGTGTTGATGCAAATGGGAACTCCTTTGATTTCACTACAAAGTTGCTGCACTTAGCATGGCACCCAACTGAAAATTCGATTGCCTGTGCTGCCGCAAATAGTTTGTACATGTACTATGCATAA 1563 0.4319 MNGGDEVVAAPAGPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGNHLATGDRGGRVVLFERTDAKDHGGSRRDLESVDYTISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKYWKVQEKKVKKISEMNVDPSKAIANGCISSIASSSNSSSPRPSYLANGGSPDKSYSYLTNDFPFPPGGIPSLRLPVVVTSHETSLIARCRRVYAHAHDYHINSISSNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLVDLRQSALCDTHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYVLSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGSRVATGSYSNLFRVFGCTPGSAEATTLEASKNPMRRQVQTPARPARSLGSSLTRVVRRGADSPGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00629 520 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 36 201 - -
Accr7g00629 520 Pfam WD domain, G-beta repeat 231 267 IPR001680 GO:0005515
Accr7g00629 520 SUPERFAMILY WD40 repeat-like 39 512 IPR036322 GO:0005515
Accr7g00629 520 Gene3D - 29 518 IPR015943 GO:0005515
Accr7g00629 520 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 121 149 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 92 120 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 380 405 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 267 294 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 324 351 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 489 518 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 406 432 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 352 379 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 239 266 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 295 323 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 15 520 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 SMART WD40_4 278 318 IPR001680 GO:0005515
Accr7g00629 520 SMART WD40_4 379 433 IPR001680 GO:0005515
Accr7g00629 520 SMART WD40_4 228 267 IPR001680 GO:0005515
Accr7g00629 520 SMART WD40_4 105 145 IPR001680 GO:0005515
Accr7g00629 520 SMART WD40_4 31 66 IPR001680 GO:0005515
Accr7g00629 520 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 213 516 - -
Accr7g00629 520 PIRSF PPA2_B55 11 520 IPR000009 GO:0000159|GO:0019888
Accr7g00629 520 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 105 119 IPR018067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00629 Accr-Chr7 9352226 9358932 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00629 K04354 - qsa:O6P43_018282 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00629 7 9352226 9358932 Accr6g00500 6 10006478 10013662 CCT
Accr6g00500 6 10006478 10013662 Accr7g00629 7 9352226 9358932 ECH
Accr7g00629 7 9352226 9358932 Accr7g00629 7 9352226 9358932 ECH