Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00536 ATGAACTTGCAACAAGTTGGGCAGGCTAGATCCTCTAATGGATATGGCCGTCGCAAATCTGAAAGAGAAGGGGCAGCCAAGTCAGAGAATAAGATCTCGTCTGGGAAGTCAAATGCCAACAGACTGGCAAGTACAGGTATGGTGACTGGCAATATAGGTGATGGTCCTTCACATGATCGACTAGTATATGTTACAACATGTCTTATTGGGCAGCAAGTGGAAGTGCATGTGAAAAATGGATCTATATACTCTGGAATATTTCATGCAACAAATACTGAGAAAGATTTTGGAATCATTTTAAAGATGGCTCGCTTGACAAAGGATGGTTCATTGCGAGGGCAGAAGTCTGGTATAGAATTAGGCAGCAAGGCTCCTTCAAAGACTTTAATCATACCTGGCAAAGAATTTGTACAAGTCATAGCAAAGGGCGTTGCTGTTACCAGGGATGGCCCACCTAATGAAGCTCACCATGAACTGTATCAGGACATCATTGTTGATTCAGTAATATCACAATCACGCCATGTCGACTTGGAGAGAGAACTACAACCATGGGTGCCTGCTGAAGACGATCCACAATGCCCTGAGCTAGAAAATATCTTCGATGAAACTTGGAATAGGGGTTGGGATCAGTTTGAAACAAACAAAGCATTGTTTGGTGTAAAAAGTACATTCAATGAGGAACTTTATACCACAAAGCTTGAGAAAGGCCCTCAGACAAGAGAGTTCGAAAAGCAAGCTTTAAGAATAGCTAGAGAAATCGAAGGTGAAGATACCCAAGATCTCCACCTGGCAGAGGAAAGAGGCCTTTATCTAAATAAGAATTTTGATATCGATGAAGAGACTAGATATTCTTCAGTCTATAGGGATAAAGGGGTTGATGACAGTGGCTACGATGAGTTTGACGATACTCTATTGAACTCACACAATTCTGAAACCTTTGGAGATACATTTGCTTCCATTGTTATGAGGTCTGGTGAATCAAGTGATGGAAAAGATGATGATGGAGTTAGAAAATCAAATTCATCCTCTAAGGATTTCCCACAATCATCTCAGGCAAGTGATGGTGTGGATTTAGGCCGTGCTGGTTCTCATAATCTTGCTAATGAGTTAGTGTCTGAACTCGCTGCAAAAAGTGAACCTACTCCAGATGCTGAATGCAGGGTTCAGGGGAACTCATTTACTGAGCTGCATGAAGCCATTGACAGGAGCAAGGAAGGAAATCGGATAGAATCTGAGGAGGTTCAACCATCAAAATCCAAGGATTTACAGTCATCACACAACTTGAAGAAAGACGAACCTAATACTGGGGCTTTGTCTTCAAACGCTGTCTCTCATGCCCCTTCATTTCATACTTCATCGAAGACTCCTGAGAAGACAGGTTTGCCTGTTGATTTGATTGGGGGTTCAACATCTGAGAAAGATAAAGGGCAAACAAATTCTTTAAAATCCTCTGGAATAACTGCCAGTTCTACATCAACTCGTACAGATTGTGTGAAAGGTGTTGCAGCATCTTCTGGTCGTGGCCTATCACCAAGTTCTTCAGTCGGTTCATCATCTTCTGAAAAATCAACATTGAATCCGAACGCAAAGGAATTCAGGCTCAATCCAAATGCAAAGAGTTTTGTTCCATCCCAATCACCTGTTAGGCCTCCCTCACAGGTTTTGGATGGCTCCTCCTATTACCAAACTAATGTAACTGCTGTACCCCATATGCCTACCCTGCCCATGGAACTTGGAATGGGACACCCATTTGCTGGGCCACATGTCCTGTATAATCCACAAGTAGCACAAATGTCATCCCAAATGTATTTTCATCCAAATGGACCACAGTACGGACAACCGGTTCATCCTAGGCAAGTTCCGTACATGCCAGGTTATTTACCTGAAACAACGTATAAGGGATTGGATTACTAA 1914 0.4248 MNLQQVGQARSSNGYGRRKSEREGAAKSENKISSGKSNANRLASTGMVTGNIGDGPSHDRLVYVTTCLIGQQVEVHVKNGSIYSGIFHATNTEKDFGIILKMARLTKDGSLRGQKSGIELGSKAPSKTLIIPGKEFVQVIAKGVAVTRDGPPNEAHHELYQDIIVDSVISQSRHVDLERELQPWVPAEDDPQCPELENIFDETWNRGWDQFETNKALFGVKSTFNEELYTTKLEKGPQTREFEKQALRIAREIEGEDTQDLHLAEERGLYLNKNFDIDEETRYSSVYRDKGVDDSGYDEFDDTLLNSHNSETFGDTFASIVMRSGESSDGKDDDGVRKSNSSSKDFPQSSQASDGVDLGRAGSHNLANELVSELAAKSEPTPDAECRVQGNSFTELHEAIDRSKEGNRIESEEVQPSKSKDLQSSHNLKKDEPNTGALSSNAVSHAPSFHTSSKTPEKTGLPVDLIGGSTSEKDKGQTNSLKSSGITASSTSTRTDCVKGVAASSGRGLSPSSSVGSSSSEKSTLNPNAKEFRLNPNAKSFVPSQSPVRPPSQVLDGSSYYQTNVTAVPHMPTLPMELGMGHPFAGPHVLYNPQVAQMSSQMYFHPNGPQYGQPVHPRQVPYMPGYLPETTYKGLDY 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00536 637 Pfam Ataxin 2 SM domain 58 142 IPR025852 -
Accr7g00536 637 MobiDBLite consensus disorder prediction 506 553 - -
Accr7g00536 637 MobiDBLite consensus disorder prediction 341 356 - -
Accr7g00536 637 MobiDBLite consensus disorder prediction 429 458 - -
Accr7g00536 637 MobiDBLite consensus disorder prediction 471 499 - -
Accr7g00536 637 MobiDBLite consensus disorder prediction 1 41 - -
Accr7g00536 637 MobiDBLite consensus disorder prediction 398 428 - -
Accr7g00536 637 Gene3D - 65 135 - -
Accr7g00536 637 MobiDBLite consensus disorder prediction 15 29 - -
Accr7g00536 637 Pfam LsmAD domain 218 288 IPR009604 -
Accr7g00536 637 MobiDBLite consensus disorder prediction 398 553 - -
Accr7g00536 637 PANTHER ATAXIN 2-RELATED 31 626 IPR045117 GO:0003723
Accr7g00536 637 FunFam Polyadenylate-binding protein-interacting protein 3 62 135 - -
Accr7g00536 637 MobiDBLite consensus disorder prediction 326 340 - -
Accr7g00536 637 SMART LsmAD_2 218 289 IPR009604 -
Accr7g00536 637 MobiDBLite consensus disorder prediction 324 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00536 Accr-Chr7 7624397 7630991 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00536 - - gmx:100812754 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00536 7 7624397 7630991 Accr6g00343 6 5448899 5455451 CCT
Accr7g00536 7 7624397 7630991 Accr7g00536 7 7624397 7630991 ECH