Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00343 ATGAATTTGCAACAAGTTGGGCAGCCCAAATCTTTTAATGGATATGGCCGCCGAAAATTTGAAAGAGAAGGAGCATTTAGGTCAGAGAACAAGAATCAGTCTGGAAAATCAAATGCCAGCAGATTAGCAAGTACAGTGACTGGCACTAAAGGTGATAATCATGGGAGTACTTCACGTGATCGATTATTGTATATAGCAACTTGCCTCATAGGGCAACAGGTGGAAGTCCATGTGAAAAGCGGATCCATATACTCTGGAATTTTCCATGCACCAAAGACTGACAAAGATTTTGGAATCATTTTGAAGATGCCTCGCTTGATGAAGGATAATTCTATTCGAGGGAAGAGGTCTGGTGTAGAATTTGCGAGCCAAGCTCCTCCAAAGACATTAATTATATCTGGCAAAGATCTTGTACAAATCATGGCAAAGGATGTTGCTTTTACTCGGTATGATCCTTGTGGTGAGGCTCACCATGAAATGCATCAGGAGATTATGGTTGATTCAGCAATATCTCAATCTCGTCATGTTGATGTGGAGAGAGAATTATTACCCTGGGTACCTGATGGAGATGATTCACAATGCCGTGAACTGGAAAATATATTGGATGGCCCTTGGAATAGAGGATGGGATCAATTTGAGACAAATGAAACATTGTTCGGCGTAAAGAGCACATTCAATGAGGAATTATATACAACAAAGCTTGAAAAAGGGCCTCATATGAGGGAGTTGGAAAAACAAGCTTTAAGAATAGCAAGAGAAATTGAGGGCGAGGAAACCCGAGATCTTCATTCTGCAGAGGAAAGAGGTTTACACCTACATGAAGACTTTGATATTGATGAAGAGACCAGATTCTCGTCCGTCTGCAGAGTTAAAGGGGCTGATGACAGTGGACATGATGAAAAAGAGGATGTACCAATAGATTCTCGTAATTCTGAGACATTTGGTGGTACGTTTGCTTCAGTCATCAAGAAATCCTGTGATTTAGCCAGTGGAGAAGGAAATGAAGTTGCTCCATTATCATCAGATTCCTCCATTATGGACCTCCCTTATTCATCTCATTCAAATATTGGCATGGATGTAAGCCGCTCTAGTTCTTATGATCCTGCTAAACAATTAGCATCTGAACTCCCTACCAACAGTTACACATCTTTGGATGGAGAAAGGGTTCAGGATTCAATCATTGATCAATATGGAACAAATGATAGTGGCAAGGAAGAAAATCAGCAGGCTGAGGATGGTCAACCGTCAAAATCTGAGGATTCACAGTCATTGCTCAACTTGAAGAAAGATGGCGCTGATAAAGGGGAATTAAATGCCTCCTCTTGTGCCCCTTCGTCTCATGTGTTATCAAGTACTCAAGAAAAGGCAGGGTCACCTGGAGATATAGTTGATAGTATGGCTTCAGGCAAAGTGAATGCAGATACAAAGTCTGAGAACTTCCATGGAAGACCAGGCAGTTCTGCTTCATCTGCTTCTGAGCATGTGGGACGTTTGACCGCATCTTCTGCTCCTGGCCTCTCATCAAGTTCTTCAGTTGGTTCATTATCGTCTGGAAAATCAACTCTGAATCCCCATGCAAGGATTTTCGTTCCATCGCAAACACCTATTAGACCTCCCTCCCCAGTGTCTGATGCTTCATTCTATTTCCCACCTAATATAGCTAGTATGCCACATATGCCAACCATGTACATTGGTGTTGGGATGGGACCCACATTTACGGGGCCACAACAGGTCATGTATAATCCGCAGGTAGCACAAGTGCCACTACCATATTTTCATCCAAATGGACAGTATGGGCAGTTTGTTGGTCATCCCAGGCAAGTCATGTACATGCCACCAGGATACATACCTGAAACGCAGTATAGGCGACGGGATGATCAGGGACTTGGTTGA 1893 0.4279 MNLQQVGQPKSFNGYGRRKFEREGAFRSENKNQSGKSNASRLASTVTGTKGDNHGSTSRDRLLYIATCLIGQQVEVHVKSGSIYSGIFHAPKTDKDFGIILKMPRLMKDNSIRGKRSGVEFASQAPPKTLIISGKDLVQIMAKDVAFTRYDPCGEAHHEMHQEIMVDSAISQSRHVDVERELLPWVPDGDDSQCRELENILDGPWNRGWDQFETNETLFGVKSTFNEELYTTKLEKGPHMRELEKQALRIAREIEGEETRDLHSAEERGLHLHEDFDIDEETRFSSVCRVKGADDSGHDEKEDVPIDSRNSETFGGTFASVIKKSCDLASGEGNEVAPLSSDSSIMDLPYSSHSNIGMDVSRSSSYDPAKQLASELPTNSYTSLDGERVQDSIIDQYGTNDSGKEENQQAEDGQPSKSEDSQSLLNLKKDGADKGELNASSCAPSSHVLSSTQEKAGSPGDIVDSMASGKVNADTKSENFHGRPGSSASSASEHVGRLTASSAPGLSSSSSVGSLSSGKSTLNPHARIFVPSQTPIRPPSPVSDASFYFPPNIASMPHMPTMYIGVGMGPTFTGPQQVMYNPQVAQVPLPYFHPNGQYGQFVGHPRQVMYMPPGYIPETQYRRRDDQGLG 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00343 630 MobiDBLite consensus disorder prediction 291 308 - -
Accr6g00343 630 MobiDBLite consensus disorder prediction 439 458 - -
Accr6g00343 630 MobiDBLite consensus disorder prediction 359 404 - -
Accr6g00343 630 MobiDBLite consensus disorder prediction 30 53 - -
Accr6g00343 630 PANTHER ATAXIN 2-RELATED 30 616 IPR045117 GO:0003723
Accr6g00343 630 SMART LsmAD_2 219 290 IPR009604 -
Accr6g00343 630 MobiDBLite consensus disorder prediction 470 519 - -
Accr6g00343 630 MobiDBLite consensus disorder prediction 359 519 - -
Accr6g00343 630 Coils Coil 240 260 - -
Accr6g00343 630 Pfam Ataxin 2 SM domain 59 143 IPR025852 -
Accr6g00343 630 MobiDBLite consensus disorder prediction 291 312 - -
Accr6g00343 630 Pfam LsmAD domain 219 289 IPR009604 -
Accr6g00343 630 MobiDBLite consensus disorder prediction 23 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00343 Accr-Chr6 5448899 5455451 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00343 - - pcin:129288905 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00536 7 7624397 7630991 Accr6g00343 6 5448899 5455451 CCT
Accr6g00343 6 5448899 5455451 Accr6g00343 6 5448899 5455451 ECH