Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02868 ATGGCACACGCTCCGCAAACCCTTGTAGCCACCGAATCAGAGCTAGATGAACCTCCTCCTCTAGGCCCTCTTTCTCTAGACTCCCCAAACCCTACTTCGCCTGAACGCTTGATGAATCCAGATTCCACCCGAATCCCGACCCTCCTCCATATTTCCTTCAATCAGGATTCTGGCTGCTTTGCCGTGGGTACGGACCATGGTTTCCGGATCTACAATTGCGATCCATTCCGCGAGATCTTTCGACGGGACTTTGGTGCAGGTGGTGGAATCGGTTTAGTTCAGATGTTGTTTCGTTGCAACATACTTGCCTTTGTCGGTGGCGGAGCTGACCCTATTTACCCAAGTAACAAAGTAATGATTTGGGATGATCATCAGTCCCGGTGTATCGGCGAGCTATCGTTTCGATCCGAGGTCAAAGGGGTTCGTCTTAGAAGGGACCGAATTGTGGTGGTTCTGGTGCATAAGATATTCGTATATAATTTCGCAGATCTTAAGTTGTTACACCAAATTGAGACAACGGCCAACCCAAAGGGACTCTGTGAGGTTTCGCACGTTTCAGGGACAATGGTGTTGGTCTGTCCAGGGTTGCAGAAGGGTCAGGTGAGGGTCGAACATTACGCCTCAAAGCGGACCAAGTTTATAATGGCGCACGATTCTAGAATAGCTTGCTTCGCGCTTACGCAGGATGGGCGGTTGCTAGCCACCGCCAGCAGCAAGGGAACTCTGGTCAGGATTTTCAATACATTGGATGGTTCATTGCTCCAAGAGGTAAGGAGGGGTGCTGACCGAGCGGAGATATACAGCCTGGCCTTTTCTGCTACTGCGCAGTGCCTAGCTGTCTCGAGTGATAAAGGAACTGTTCATGTCTTCAACCTGAAGGTTGATTCAGGACTATTGGGGCTTGAGAGAGTACAGAGTGCATCTGAATCTAATCCTGCCAACCCGTCAGCTGCTTCATCTCTTTCATTTATAAAAGGTGTTCTGCCCAAGTATTTTAGCTCAGAATGGTCTGTGGCTCAGTTTCGCTTGCATGAAGGTTTGCAACATGTTGTTGCCTTTGGCCATCTGAAGAACACAATTGTAATCCTTGGGATGGATGGAAGCTTCTATCGATGCCAGTTTGATCCGGTGAATGGTGGAGAGATGAGCCAAGTTGAATATCACAACTTCTTGAAGCCAGGAGAAATATTCTAG 1194 0.4866 MAHAPQTLVATESELDEPPPLGPLSLDSPNPTSPERLMNPDSTRIPTLLHISFNQDSGCFAVGTDHGFRIYNCDPFREIFRRDFGAGGGIGLVQMLFRCNILAFVGGGADPIYPSNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLVHKIFVYNFADLKLLHQIETTANPKGLCEVSHVSGTMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGRLLATASSKGTLVRIFNTLDGSLLQEVRRGADRAEIYSLAFSATAQCLAVSSDKGTVHVFNLKVDSGLLGLERVQSASESNPANPSAASSLSFIKGVLPKYFSSEWSVAQFRLHEGLQHVVAFGHLKNTIVILGMDGSFYRCQFDPVNGGEMSQVEYHNFLKPGEIF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02868 397 SMART WD40_4 207 247 IPR001680 GO:0005515
Accr5g02868 397 SMART WD40_4 31 72 IPR001680 GO:0005515
Accr5g02868 397 SMART WD40_4 250 291 IPR001680 GO:0005515
Accr5g02868 397 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 46 390 - -
Accr5g02868 397 Pfam WD domain, G-beta repeat 260 291 IPR001680 GO:0005515
Accr5g02868 397 SUPERFAMILY WD40 repeat-like 46 294 IPR036322 GO:0005515
Accr5g02868 397 Gene3D - 42 378 IPR015943 GO:0005515
Accr5g02868 397 MobiDBLite consensus disorder prediction 1 41 - -
Accr5g02868 397 FunFam Autophagy-related protein 18a isoform A 46 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02868 Accr-Chr5 54255450 54257918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02868 K22991 - qsa:O6P43_007499 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01872 2 52875551 52876672 Accr5g02868 5 54255450 54257918 CCT
Accr5g02868 5 54255450 54257918 Accr5g02868 5 54255450 54257918 ECH
Accr2g03196 2 67703450 67706349 Accr5g02868 5 54255450 54257918 ECH