Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03196 ATGGCTACCGTCTCTACCACTACCAGCTCTTCCCCTCCATGGACAAGCCCTAACCCTAATTCTGATCTTAACCCCGAATTTCATGAAGACCAATCACAAACCCTTGACTTGGATTCCACGATACATCGCCAATCAACCCTACCTCACCAAGTATCCTCTCAGCCAAGTCCCCCTACTAGTCCACCGAAGTCTCATGCTCCGATAACCCCGACTCTGCTTCAGCTCTCTTTCAACCAAGATCAAGCTTGCTTCGCCGCCGCCACCGACAACGGGTTTCGCATCTATAATTGCGACCCATTTCGGGAGCTCTTCCGCAGAGAATTTGATGGAAGCGATGGCAGTACTGGGGGGATTGGTCAAGTGGAAATGCTCTTTCGCTATAATATGCTGGCACTCGTTGGAGGTGGCGCCCATCCTCAATACCCTCCCACCAAGGTGATGATCTGGGATGATCATCAAGGCAGGTGCATTGGTGAGCTTTCATTTCGATCAGTTGTTCGTGGTGTCCGGCTTCGACGAGACCGAATCATTGTAGTTGTAGAGCAGAAGATTTTTGTGTACAATTTCGCCGACTTTAAGTTACTTCATCAAATTGAAACCCTTGCAAACCCAAAGGGGCTCTGTGCAGTTTCGCAATCGGCTGATTCTATGATATTGGCGTGTCCCGGTTTGCATAAGGGTCAGATACGAGTTGAGCATTATGCACAGAGAAAAACCAAATTCATTTCGGCGCATGATTCAAGAATAGCTTGTTTCACTCTTACTCTTGATGGGCAGTTACTCGCCACCGCCAGTACCAAGGGTACTTTGATTCGAATTTTTGATACAGCCAATGGGACGCTGCTTCAAGAGGTAAGAAGGGGCGCACATGTGGCAGAGGTCTATAGTTTGGCCTTCTCTTCTACTGCTCAGTGGCTAGCAGTCTCAAGCGACAAGGGTACTGTCCATGTTTTCAGCCTGAAGGCTAACTCTAGTTCTCCTCAGCATGAAAATTCACAGATTGCAACTGATTCTCATGCTGCCAGTACACCATCTAGCTCACCCCGCGGATTTGTTAAATTTAAAGGAGTATTACCAAAGTATTTTAATTCGAAGTGGTCACTTGCTCAGTTTCGCTTACATGAGGGCACTTGTTACACTGTTGCATTTGGTCAGCAAAAGAATACAGTCATAATTCTTGGCATGGATGGGAGCTTCTACCGGTGTCAGTTTGATCCAGAGCATGGTGGTGAGATGAATAAACTGGAATATCAGAACTTCTTAATGCCAGAGACGGCCTCGTGA 1284 0.472 MATVSTTTSSSPPWTSPNPNSDLNPEFHEDQSQTLDLDSTIHRQSTLPHQVSSQPSPPTSPPKSHAPITPTLLQLSFNQDQACFAAATDNGFRIYNCDPFRELFRREFDGSDGSTGGIGQVEMLFRYNMLALVGGGAHPQYPPTKVMIWDDHQGRCIGELSFRSVVRGVRLRRDRIIVVVEQKIFVYNFADFKLLHQIETLANPKGLCAVSQSADSMILACPGLHKGQIRVEHYAQRKTKFISAHDSRIACFTLTLDGQLLATASTKGTLIRIFDTANGTLLQEVRRGAHVAEVYSLAFSSTAQWLAVSSDKGTVHVFSLKANSSSPQHENSQIATDSHAASTPSSSPRGFVKFKGVLPKYFNSKWSLAQFRLHEGTCYTVAFGQQKNTVIILGMDGSFYRCQFDPEHGGEMNKLEYQNFLMPETAS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03196 427 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 70 420 - -
Accr2g03196 427 Gene3D - 69 409 IPR015943 GO:0005515
Accr2g03196 427 SUPERFAMILY WD40 repeat-like 65 403 IPR036322 GO:0005515
Accr2g03196 427 MobiDBLite consensus disorder prediction 1 68 - -
Accr2g03196 427 MobiDBLite consensus disorder prediction 37 53 - -
Accr2g03196 427 Pfam WD domain, G-beta repeat 289 318 IPR001680 GO:0005515
Accr2g03196 427 SMART WD40_4 278 319 IPR001680 GO:0005515
Accr2g03196 427 SMART WD40_4 364 403 IPR001680 GO:0005515
Accr2g03196 427 SMART WD40_4 58 96 IPR001680 GO:0005515
Accr2g03196 427 SMART WD40_4 235 275 IPR001680 GO:0005515
Accr2g03196 427 MobiDBLite consensus disorder prediction 324 347 - -
Accr2g03196 427 FunFam Autophagy-related protein 18a isoform A 70 406 - -
Accr2g03196 427 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03196 Accr-Chr2 67703450 67706349 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03196 K22991 - gmx:100781692 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03196 2 67703450 67706349 Accr2g03196 2 67703450 67706349 ECH
Accr2g03196 2 67703450 67706349 Accr5g02868 5 54255450 54257918 ECH