Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02658 ATGACTTTCTTCGTCTTGCTCTTTCTCGTTTCCCTCTTTTCTGCTTCTCACGCCTTCACTCCCCACAGCCACCACCGTCACCTTGCCTCTCACAATTACAGAGATGCCCTCTCCAAATCCATCCTCTTCTTTGAAGGACAGAGGTCCGGCAAACTCCCTCCTAACCAGGGGATGACTTGGAGGGGAGACTCTGCTCTCTCAGACGGCTCTGCAATGCATGTTGATTTAGTGGGAGGGTACTACGATGCAGGGGACAATGTGAAGTTTGGTTTTCCCATGGCATTCACAGCCACCATGCTTTCCTGGAGTGTTATTGAGTTTGGTGGACTGATGAAAGGTGAAGTGCAGAATGCTAGAGAAGCCATTCGTTGGGCTACGGATTACCTACTTAAGGCTACTCAACATCCAGACGTCATTTACGTTCAGGTGGGAGATGCTAGAAGTGATCACGTTTGTTGGGAGAGACCGGAGGACATGGATACCCCAAGAAATGTGTACAAGATAGATAAGAACAACCCTGGTTCAGATGTGGCGGCTGAAACTGCAGCCGCTCTAGCTGCTGCTTCTCTGGTTTTTAAGAAATGTGACCCCGCCTACTCCAAAACTCTAGTCACCAGGGCTACAAGGGTGTTTGAGTTTGCTGATAAATACAGGGGAGCTTACAGTGATGGGCTGAGGCCCATTGTATGCCCTTTTTATTGCTCTTACTCTGGTTACCAGGATGAGCTGTTATGGGGTGCTGCGTGGCTGCACAAGGCTACTGGGAAGCCCATGTACCTAAAGTATATTCAAGTGAATGGACCCACCCTTGGGGCTGCGGAGTTTGACAATATGTTTGGGTGGGATAACAAGCATGTTGGAGCAAGGATGCTGCTTTCGAAGGGATTCCTTGTTCAAAAAGTGCAATCGCTCCATGAGTACAAGGCGCTTGCGGACAATTTCATATGTTCCATAATTCCTGGGACCTCTTTCTCTGCTTCCCAATATACCCCAGGGGGGCTTCTGTTCAAGATGAGTGATAGCAACATGCAGTACGTGACGTCCACTTCCTTCCTGCTCCTAACCTATGCCAAGTACCTGACCTCAGCCCACATGTCTGTCAGCTGTGGTGGAGCCACTGTCACCCCCAAGACTCTTCGCACTTTGGCCAAAAAACAGGTTGATTACTTGTTGGGAGACAACCCCTTGAAGATGTCCTACATGGTGGGGTACGGTCCAAATTACCCGCGAAGGATACACCACAGGGGGTCATCTCTACCGTCGATTGAAGTGCACCCCGCCAAGATCCAATGCTCCGCAGGCTTCAGCGCCTTGAGCTCACAGAGCCCGAATCCCAACGTACTAGTGGGAGCGGTGGTTGGTGGGCCAGACTTGCACGATAGGTTTCCGGATGAACGGTCAGATTATGCGCAGTCGGAGCCGGCCACGTACACGAACGCCCCTCTTGTAGGCGCCCTGGCTTATCTTGCTCACTCATTCGGACAACTCTAA 1491 0.5091 MTFFVLLFLVSLFSASHAFTPHSHHRHLASHNYRDALSKSILFFEGQRSGKLPPNQGMTWRGDSALSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTATMLSWSVIEFGGLMKGEVQNAREAIRWATDYLLKATQHPDVIYVQVGDARSDHVCWERPEDMDTPRNVYKIDKNNPGSDVAAETAAALAAASLVFKKCDPAYSKTLVTRATRVFEFADKYRGAYSDGLRPIVCPFYCSYSGYQDELLWGAAWLHKATGKPMYLKYIQVNGPTLGAAEFDNMFGWDNKHVGARMLLSKGFLVQKVQSLHEYKALADNFICSIIPGTSFSASQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHMSVSCGGATVTPKTLRTLAKKQVDYLLGDNPLKMSYMVGYGPNYPRRIHHRGSSLPSIEVHPAKIQCSAGFSALSSQSPNPNVLVGAVVGGPDLHDRFPDERSDYAQSEPATYTNAPLVGALAYLAHSFGQL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02658 496 FunFam Endoglucanase 29 494 - -
Accr5g02658 496 Pfam Glycosyl hydrolase family 9 33 486 IPR001701 GO:0004553|GO:0005975
Accr5g02658 496 SUPERFAMILY Six-hairpin glycosidases 30 494 IPR008928 GO:0005975
Accr5g02658 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 462 480 IPR033126 -
Accr5g02658 496 PANTHER ENDO-1,4-BETA-GLUCANASE 7 491 - -
Accr5g02658 496 Gene3D - 28 496 IPR012341 GO:0005975
Accr5g02658 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02658 Accr-Chr5 52666232 52668411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02658 1 492 Glycoside Hydrolase AT1G02800 75.659 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02658 K01179 - cit:102614738 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03247 2 68046224 68048354 Accr5g02658 5 52666232 52668411 CCT
Accr5g02658 5 52666232 52668411 Accr5g02658 5 52666232 52668411 ECH