Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03247 ATGCCTCTCTCCCTTCACTCCTCTGCTTTTCTGCTCCTCCTTTCTCTCTTCTCCACCGCTCTGCTTCACTGCCATGCCTTCCCTCTCCGCCACAATCACCCTCCTCGCCATCTCCGTCATCCTCGTTTCGCCGCCCACAACTATGGAGATGCTCTCTCCAAATCCATTCTCTTTTTTGAAGGTCAGAGATCGGGGAAGCTCCCTCCTAACCAGAGGATGACTTGGAGGAGGGACTCTGGTCTCTCTGATGGCTCAGCCTTGCACGTTGATTTGGTTGGAGGGTACTATGATGCAGGGGACAATGTCAAGTTTGGTCTTCCCATGGCATTCACCACCACCATGCTTTCCTGGAGCGTTATTGAGTTTGGGGGTCTCATGAAAGGTGAGTTGCAGAACGCCAGAGAGGCCATTCGCTGGGCTACTGATTATCTTCTCAAAGCCACTGCACATCCAGACACCATCTATGTTCAGGTGGGAGATGCCAAAAAGGACCATGCTTGTTGGGAGAGACCTGAAGATATGGATACCCCAAGAAATGTTTACAAGATAGACAGGAATACCCCCGGTTCAGAAGTAGCTGCTGAAACTGCTGCTGCTCTTGCAGCTGCTTCTCTGGTTTTCAGAAGAAGCGACCCCATGTACTCTAAAATATTAATCAGAAGAGCTATTAGGGTGTTCCAGTTCGGTGATAGATACAGGGGATCCTACAGCAACGGCTTGAAGCACATCGTGTGCCCTTTCTACTGCTCTTTCTCTGGCTATCAGGATGAGTTATTGTGGGGAGCTGCTTGGCTGCACAAGGCGACGAAGAACCCAATGTACCTACATTACATTCAAGTTAACGGACAAACCCTTGGGGCTGCAGAGTTCGACAATACGTTTGGGTGGGATAACAAACATGCCGGAGCTAGGATACTTCTAACTAAGGAATTTCTAGTTGAAAGGGTCCAATCCCTGCATGAATACAAGGGTCATGCGGACAATTTCATATGTTCTCTCATTCCCGGAGCTTCGTTTTCTTCAACCCAATATACCCCCGGTGGGCTTCTGTTCAAGATGAGTGATAGCAACATGCAGTATGTGACGTCCTCTTCTTTCTTACTCTTAACCTACGCCAAATACTTGACCTCCTCCCACTTGGTCGTTAACTGTGGCGGAACCGCGGTGACCCCCAAGAGGCTCCGAGCAATAGCCAAGAAACAGGTGGATTACTTGCTCGGAGACAACCCGTTGAAGATGTCGTACATGGTGGGGTATGGGCCAGAGTTCCCAAGAAGGATACACCACAGGGGATCATCCCTACCGTCGATCTCAGTACATCCGGGGAAGATCCAATGCTCAGCAGGCTTCAGTGTGATGAAGTCGCAATCCCCGAATCCAAACATTCTGGTGGGAGCCGTTGTGGGTGGACCCGACCTCCATGACAGGTTCCCAGATGAGCGGTCAGATTATGAGCAATCAGAGCCAGCCACTTACATCAACGCACCCTTGGTAGGAGCACTGGCCTATCTTGCTCACTCATTTGGCCAACTCTAG 1536 0.5033 MPLSLHSSAFLLLLSLFSTALLHCHAFPLRHNHPPRHLRHPRFAAHNYGDALSKSILFFEGQRSGKLPPNQRMTWRRDSGLSDGSALHVDLVGGYYDAGDNVKFGLPMAFTTTMLSWSVIEFGGLMKGELQNAREAIRWATDYLLKATAHPDTIYVQVGDAKKDHACWERPEDMDTPRNVYKIDRNTPGSEVAAETAAALAAASLVFRRSDPMYSKILIRRAIRVFQFGDRYRGSYSNGLKHIVCPFYCSFSGYQDELLWGAAWLHKATKNPMYLHYIQVNGQTLGAAEFDNTFGWDNKHAGARILLTKEFLVERVQSLHEYKGHADNFICSLIPGASFSSTQYTPGGLLFKMSDSNMQYVTSSSFLLLTYAKYLTSSHLVVNCGGTAVTPKRLRAIAKKQVDYLLGDNPLKMSYMVGYGPEFPRRIHHRGSSLPSISVHPGKIQCSAGFSVMKSQSPNPNILVGAVVGGPDLHDRFPDERSDYEQSEPATYINAPLVGALAYLAHSFGQL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03247 511 FunFam Endoglucanase 44 509 - -
Accr2g03247 511 Gene3D - 43 511 IPR012341 GO:0005975
Accr2g03247 511 SUPERFAMILY Six-hairpin glycosidases 45 509 IPR008928 GO:0005975
Accr2g03247 511 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 477 495 IPR033126 -
Accr2g03247 511 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 404 430 IPR018221 -
Accr2g03247 511 Pfam Glycosyl hydrolase family 9 48 501 IPR001701 GO:0004553|GO:0005975
Accr2g03247 511 PANTHER ENDO-1,4-BETA-GLUCANASE 26 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03247 Accr-Chr2 68046224 68048354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03247 1 507 Glycoside Hydrolase AT1G02800 74.359 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03247 K01179 - gmx:100777718 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03247 2 68046224 68048354 Accr5g02658 5 52666232 52668411 CCT
Accr2g03247 2 68046224 68048354 Accr2g03247 2 68046224 68048354 ECH