Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02540 ATGGAACTCAGTAAAGTCACGTTGGAGATCTTCTCCAAGCTGGAGCAGAAATGGCTCTTCTCTCGCTGCGAAACCACCGATAAGACCCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCTGTTGTTGCCGGCACCGCCCTTGTTCGCCTCGAGGACCAGATCCGCCTCCAGACCCGCAATCCCCAGGCTCAAATCGCAGACTTCTTTGACATCATTGCTGGGACCGGCATTGGTGCCATCCTTGCCGCCATGATCACTGCCGATGAAGGCTCCGGAAGGCCCCTCTTCACTGCCAGAGACGCCGTGCGTGTCGTCACCCAGAGGAATTCTGAACTCTTTAAGCCTAAACTCCCCAGAGTTCTCCGCTGGCGGTGTCGTAGATTTTCTTCCAAGAGCATGGACAAGGTGGTGAAGGAAGTATTCCGGAGAAGAGTTGATGGACGACTATTAACCTTGAAGGACACGTGTAAGCCCCTGCTCATACCTTGCTTTGACCTCAAGAGTGCCGCCCCGTTTGTGTTCTCACGCGCTGACGCGTCCGAGTCGCCCAGTTTCAACTTCGAGCTCTGGAAAGTTTGTCGCGCCACCTCAGCCACGCCGAGCCTCTTCAAGCCTTTTCAGTTTACCTCCCTCGACGGAAAGACCTCCTGCCGCGCCATCGACGGAGGACTGGTGATGAACAACCCAACGGCGGCGGCCGTGACTCACGTGCTGCACAACAAGCGTGACTTTCCTTCAGTGAGTGGCGTGAGTGATCTCTTGGTCCTCTCCATAGGAAATGGGACGACGTCGGTCATCGGAGCTTCAGGGAGGAAGGTGAGTGAGAAGGAGGAGACACTGTGTTCGATGTCGTCCATGGTTGACATTGTGGTGGATGGCGTGTCGGAGACCATTGACCAAATGCTGGGAAATGCCTTCTGTCGGAATCGTTCCGACTATGTCAGACTCCAGGCGTTGGGTTTGGGGAGTGGGGAGGAGGTGCTGAAGGAGAAAGGCGTGGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGAAAGAGACTAACGGACACAGAATCGATAGCTTTGTGCAGCGTCTTGTTGCTTCGGGAAAGGCCAATGCAGCCGCCGTCAACCCTATCGCCGGCAGTTAG 1134 0.5582 MELSKVTLEIFSKLEQKWLFSRCETTDKTRILSIDGGGTTAVVAGTALVRLEDQIRLQTRNPQAQIADFFDIIAGTGIGAILAAMITADEGSGRPLFTARDAVRVVTQRNSELFKPKLPRVLRWRCRRFSSKSMDKVVKEVFRRRVDGRLLTLKDTCKPLLIPCFDLKSAAPFVFSRADASESPSFNFELWKVCRATSATPSLFKPFQFTSLDGKTSCRAIDGGLVMNNPTAAAVTHVLHNKRDFPSVSGVSDLLVLSIGNGTTSVIGASGRKVSEKEETLCSMSSMVDIVVDGVSETIDQMLGNAFCRNRSDYVRLQALGLGSGEEVLKEKGVESLPFGGKRLLKETNGHRIDSFVQRLVASGKANAAAVNPIAGS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02540 377 PANTHER PATATIN-LIKE PROTEIN 6 1 367 - -
Accr5g02540 377 Pfam Patatin-like phospholipase 32 234 IPR002641 GO:0006629
Accr5g02540 377 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 32 235 IPR002641 GO:0006629
Accr5g02540 377 Gene3D Cytosolic phospholipase A2 catalytic domain 20 371 - -
Accr5g02540 377 SUPERFAMILY FabD/lysophospholipase-like 27 323 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02540 Accr-Chr5 51741352 51742580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02540 1 375 Acyl Lipid Metabolism Gene Families AT3G63200 67.708 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02540 - - pvy:116130636 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01890 2 53058374 53059727 Accr5g02540 5 51741352 51742580 CCT
Accr5g02540 5 51741352 51742580 Accr5g02540 5 51741352 51742580 ECH