Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01890 ATGGAGCTCAGCAAGGTCACGCTGGAGATCTTCTCTAAATTGGAGCAGAAATGGCTTTCTCACTGTGAAACCACCAAGAAAACTCGCATTCTCAGCATCGACGGTGGAGGAACCACCGGCATTGTCGCTGGAGCATCCCTCCTCCACCTTGAGCAACAGATCCGTCTCCAGACCGGCGATTCCGATGCACATATAGCCGATTTCTTCGACATAGTTGCCGGTACTGGCATTGGAGCCATCCTTGCCGCCATGATCACTGCCGACGATGGCTCCGGTAGGCCTCTCTATACTGCTAAGGACGCCGTCCATATCATCACCGAAAGGAACTCGGAACTCTACAAGCCTAAGACCGCCGGATTTTTTTCCCGTCGCCGGAGACTGTCTTCCAGGAGCATGGATAACGTGTTGAAGCAAGTCTTCCAGAGAAAAGAAGGCGGAAAGTTGTTGACCTTGAAGGACACGTGTAAACCCCTGCTTATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCATTCGTGTTTTCCCGAGCTGACGCGTCCGAATCGCCGAGTTTCAACTTCGAGCTCTGGAAGGTATGCCGCGCCACCACAGCCACACCGAGCCTCTTCAAGCCCTTCGACTTCACTTCCGTGAACGGCAAGACCAGCTGCTCCGCCGTCGACGGCGGTCTGGTGATGAACAACCCGGCGGCGGCGGCCGTGACTCACGTGCTACACAACAAGCGGGATTTCCCGACAGTTAACGGCGTGGAGGATCTCCTAGTACTGTCCTTAGGCAACGGTGCGTCCGGTGGAACACAAGCACGAAAGATATGTGATAACGGCGAGTGTTCGACATCGTGCGTGGTCGACATTGTAGCGGATGGGGTCTCCGAGACGATCGACCAAATGTTAGGGAACGCGTTCTGTTGGAACCATACGGATTACGTAAGGATTCAGGCGTTGGGTTTAGGAAGGACGAGAGAGGAAGTGCTGAAAGAAAGAGGACTAGAGTCATTAGCGTTTGGTGGGAAGAGATTGCTGAAAGAGAGTAACGAAGAGAGAATCGATAGCTTCGTGCAGCGTCTTGTTGCTTCTGGAAAGTCCAGCCTCCCACCTAGTCCCTGCAAGCATTCCGCCGGCGCCGTTACTCCTCTTGCCGTCGCTGAGGCTCGCTAG 1155 0.5437 MELSKVTLEIFSKLEQKWLSHCETTKKTRILSIDGGGTTGIVAGASLLHLEQQIRLQTGDSDAHIADFFDIVAGTGIGAILAAMITADDGSGRPLYTAKDAVHIITERNSELYKPKTAGFFSRRRRLSSRSMDNVLKQVFQRKEGGKLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATTATPSLFKPFDFTSVNGKTSCSAVDGGLVMNNPAAAAVTHVLHNKRDFPTVNGVEDLLVLSLGNGASGGTQARKICDNGECSTSCVVDIVADGVSETIDQMLGNAFCWNHTDYVRIQALGLGRTREEVLKERGLESLAFGGKRLLKESNEERIDSFVQRLVASGKSSLPPSPCKHSAGAVTPLAVAEAR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01890 384 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Accr2g01890 384 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Accr2g01890 384 CDD Pat17_PNPLA8_PNPLA9_like 30 313 - -
Accr2g01890 384 Gene3D Cytosolic phospholipase A2 catalytic domain 17 363 - -
Accr2g01890 384 PANTHER PATATIN-LIKE PROTEIN 6 1 372 - -
Accr2g01890 384 SUPERFAMILY FabD/lysophospholipase-like 26 315 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01890 Accr-Chr2 53058374 53059727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01890 1 379 Acyl Lipid Metabolism Gene Families AT3G63200 73.822 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01890 - - pop:7464678 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01890 2 53058374 53059727 Accr5g02540 5 51741352 51742580 CCT
Accr2g01890 2 53058374 53059727 Accr2g01890 2 53058374 53059727 ECH