Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02201 ATGGATCGGCTTGCATCCACCACTATTCTGCCAGATGACACTTCCCTGCAAATTGGGTTCATTTGGAGTCAAATCAAGGTCCCATTGATCGTGCCGCTTCTGAGAATAGCAGTGGTTTTCTGCCTGATCATGTCCTTGTTGATGTTCATCGAGAGGGTGTACATGGGCGTCGTCATTACCTTGGTGAAACTATTCGGGCGAAAACCAGAGAAGCGTTACAAATGGGAGGCCATGAAGGACGACATAGAGCTGGGCAACTCAGCTTATCCAATGGTGCTTGTTCAAATCCCAATGTACAACGAAAGAGAGGTATATAATCTGTCCATTGGAGCGGCTTGTGGGCTTTCTTGGCCTTCAGACAGGATCATAATACAAGTTCTGGATGATTCCACTGACCCGACGATTAAGAGCATGGTGGAGATGGAATGCCGGAGATGGGCGAGCAAAGGCATAAACATAAAGTACGAGATAAGGGACAACAGAAACGGGTACAAAGCAGGGGCTCTAAAAGAGGGGATGAAACGAAGCTACGTGAAGCAGTGCGACTACGTGGCCATTTTGGACGCCGATTTTCAACCAGAGCCTGATTTCCTTTGGCGCACCGTCCCTTTCCTCCTCCACAATCCTCAACTCGCTCTTGTTCAGGCTCGCTGGAAGTTTGTGAATTCGGACGAGTGTTTGATGACAAGGATGCAGGAGATGTCGCTAGATTATCATTTTACGGTGGAGCAAGAAGTGGGCTCTTCCACCTATGCCTTCTTCGGATTCAATGGGACTGCTGGAGTATGGAGAATCTCCGCTCTGAATGAGGCTGGTGGCTGGAAGGATAGGACCACTGTGGAAGATATGGACCTCGCTGTGAGAGCCAGTCTCAATGGCTGGAAATTCCTCTACTTAGGCAATTTAAAGGTTAAGAACGAACTGCCAAGTACTTTCAAGGCGTATCGCTACCAACAACATCGCTGGTCTTGTGGTCCGGCCAATCTTTTCAGGAAAATGGCATGGGAGATTATGACCAGCAGGAAAGTGTCCTTGTGGAAGAAGATACATGTGATCTACAGCTTCTTCTTCGTTCGGAAAGTTGTTGCCCACATCAACACATTTATATTCTACTGCATAGTATTGCCTGCAACTGTCTTGGTGCCTGAGGTCGTGGTCCCAAAGTGGGGAGCTGTATATATCCCTTCCATCATCACCCTTCTTAATGCAGTTGGAACTCCGAGGTCACTGCACTTGCTAGTCTTTTGGATTCTGTTTGAGAATGTCATGTCTCTACATCGAACAAAGGCAACCATTATTGGTCTGCTAGAGGCAAGTCGAGTGAATGAGTGGATTGTCACTGAAAAACTTGGAGATGCTCTCAAAGCTAAAGCAGGCACTAAAGCATCTAAGAAGCCTCGCTTGCGGATTGGAGACAGGGTTTGCTTGTTAGAGCTTGGGGTTGGATTTTACCTCTTCTTTTGCGGCTGCTATGATTTCCTGTTTGGGAAAAACCATTACTTCATATTCCTTTATATACAAGCATTTGCCTTCTTTGTCTTGGCCTTTGGATATGTTGGCACCTTTGTTCCCAACTCATAG 1581 0.4681 MDRLASTTILPDDTSLQIGFIWSQIKVPLIVPLLRIAVVFCLIMSLLMFIERVYMGVVITLVKLFGRKPEKRYKWEAMKDDIELGNSAYPMVLVQIPMYNEREVYNLSIGAACGLSWPSDRIIIQVLDDSTDPTIKSMVEMECRRWASKGINIKYEIRDNRNGYKAGALKEGMKRSYVKQCDYVAILDADFQPEPDFLWRTVPFLLHNPQLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLNGWKFLYLGNLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAWEIMTSRKVSLWKKIHVIYSFFFVRKVVAHINTFIFYCIVLPATVLVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKAKAGTKASKKPRLRIGDRVCLLELGVGFYLFFCGCYDFLFGKNHYFIFLYIQAFAFFVLAFGYVGTFVPNS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02201 526 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 17 521 - -
Accr5g02201 526 Pfam Glycosyltransferase like family 2 91 325 - -
Accr5g02201 526 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 82 305 IPR029044 -
Accr5g02201 526 FunFam Glucomannan 4-beta-mannosyltransferase 9 81 309 - -
Accr5g02201 526 CDD CESA_CaSu_A2 90 326 - -
Accr5g02201 526 SUPERFAMILY Nucleotide-diphospho-sugar transferases 87 369 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02201 Accr-Chr5 48251583 48255281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02201 1 525 Miscellaneous Gene Families AT5G03760 80.113 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02201 K13680 - gmx:100810016 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g00290 2 7142815 7149344 Accr5g02201 5 48251583 48255281 CCT
Accr5g02201 5 48251583 48255281 Accr13g00411 13 4090201 4094412 ECH
Accr5g02201 5 48251583 48255281 Accr5g02201 5 48251583 48255281 ECH