Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00411 ATGGTCGAAGCTGAACCCAAATTCTTCATGCCAGACTCAGTCCGAAGTGTGAGTTATGACATCGCCGGACAGATTCAGCTCATATGGGAAATGGTCAAAACGCCATTAATTGTGCCACTTCTGAACCTCGGAGTCTACATTTGCCTGGCAATGGCTCTTATGCTCTTCATCGAGAGGCTTTACATGGGAGTCGTTATCATCCTCGTCAAGCTCTTCTGGAAAAAACCAGAACAGCGTTATAGATATGAGCCTATTCCAGACGATGTTGAATTGGGATCCTCCAATTTCCCCGTAGTTCTCATCCAAATCCCAATGTTCAATGAAAGAGAGGTTTATAAGGTCTCCATTGGAGCAGCTTGTGGGCTTTCATGGCCTTCAGACCGTCTGGTGATCCAAGTCCTCGATGATTCTACTGACCCTGCAGTTAAGCAATTGGTGGAGCAAGAGTGTCTTAGATGGGCAAGCAAAGGAATAAACATAACGTATCAAATCAGAGAGAACAGAACAGGGTACAAAGCAGGGGCGCTGAAAGAAGGGCTGAAGCGAAGCTACGTGAAACACTGCGAGTACGTGGCCATTTTCGACGCCGACTTCCGCCCGGAGCCGGACTATCTCCGGCGAGCCATTCCCTTTTTGGATGGCAACCCCGACCTGGCTCTGGTTCAAGCACGCTGGAGATTCGTGAATGCGGATGAATGTTTATTGACAAGGATGCAAGAGATGTCTCTGGATTACCATTTCACAGTGGAGCAAGAAGTTGGGTCAGCAACTCATGCCTTCTTTGGTTTCAATGGCACAGCAGGTGTTTGGAGAATTGCCGCTATCAATGAAGCAGGAGGTTGGAAAGACAGAACAACTGTGGAGGACATGGATCTTGCCGTTCGTGCCAGCCTTCGAGGTTGGAAATTTCTCTACCTTGGTGACCTCCAGGCCAAAAGTGAGCTTCCCAGTACTTTAAGGGCCTTCCGTTTTCAGCAACATCGCTGGTCTTGTGGTCCTGCAAATCTTTTCCGCAAAATGGTGATGGAGATTGTGAGGAACAAGAAAGTGAAGTTTTGGAAGAAGGTGTATGTGATATACAGCTTCTTCTTTGTACGTAAGATCATAGCCCACATGGTAACATTCTTCTTCTACTGTGTGGTGCTTCCCCTCACAATTTTGGTCCCTGAGGTTCATGTTCCTATATGGGGAGCTGTTTACATCCCTTCCATTATCACCATCCTCAACTCAGTGGGAACTCCGAGGTCCGTTCACTTATTGTTCTACTGGATCCTCTTTGAGAATGTCATGTCCCTGCATCGTACCAAGGCTACTTTTATTGGTCTGTTTGAAGCTGGAAGAGCTAATGAGTGGGTTGTCACTGCAAAACTTGGAGACTCCGTGAATAATAAGAAATCAGATTCTGTTAAGAACAAGACAAATGTCACAAAACCTATTAAAAAACCCAGACTCAAACTTGCTGAAAGGTTTAATTTGCTAGAGCTGGGATTTGCAGCCTTCCTGTTCTTTTGTGGATGCTATGATTTTGTAAATGGGAAGCACAACTACTTTATATACCTCTTCCTTCAGACCATAAGCTTTTCCATCGTGGGATTTGGTTATGTTGGCACCATTGTGTAG 1620 0.4574 MVEAEPKFFMPDSVRSVSYDIAGQIQLIWEMVKTPLIVPLLNLGVYICLAMALMLFIERLYMGVVIILVKLFWKKPEQRYRYEPIPDDVELGSSNFPVVLIQIPMFNEREVYKVSIGAACGLSWPSDRLVIQVLDDSTDPAVKQLVEQECLRWASKGINITYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPFLDGNPDLALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSVHLLFYWILFENVMSLHRTKATFIGLFEAGRANEWVVTAKLGDSVNNKKSDSVKNKTNVTKPIKKPRLKLAERFNLLELGFAAFLFFCGCYDFVNGKHNYFIYLFLQTISFSIVGFGYVGTIV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00411 539 Pfam Glycosyl transferase family group 2 190 399 IPR001173 -
Accr13g00411 539 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 22 537 - -
Accr13g00411 539 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 316 IPR029044 -
Accr13g00411 539 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Accr13g00411 539 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 378 IPR029044 -
Accr13g00411 539 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00411 Accr-Chr13 4090201 4094412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00411 1 539 Miscellaneous Gene Families AT5G22740 81.516 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00411 K13680 - gmx:100788761 960.674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00411 13 4090201 4094412 Accr13g00411 13 4090201 4094412 ECH
Accr2g00290 2 7142815 7149344 Accr13g00411 13 4090201 4094412 ECH
Accr5g02201 5 48251583 48255281 Accr13g00411 13 4090201 4094412 ECH