Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01956 ATGACGGTGACACCTGATATATTCATCAACGATGGGAACTTGGTGGTCCATGGAAAGAACATTCTGACAGGTGTACCAGACAACATTCTGCTCACTCCTGAGCCTGGGGATGGGCTTGTTTCCGGTGCATTTCTTGGCGCCACTTCTTCGAAGTCCAAAAGCCTCCATGTGTTTCCTCTGGGTGTCCTTGAGGGACATAGGTTTATGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACTAATAGAATGGGAACTTGTGGGAAAGACGTGCCTCTGGAGACCCAGTTCATGCTGGTGGAAAGCAGAGAAGAACATTCTAGAACCATCTACATAGTGTTGCTTCCTCTGCTGGAAGGCCAGTTCCGTGCTGTTCTACAGGGCAATCCCAAAAACGAATTGGAGATCTGCCTTGAGAGTGGGGACGACACTGTTGAGACCGACCAAGGGCATCACTTGGTCTACATGCATGCAGGGACCAACCCCTTTGAAGTCATCAATCACTCAGTCAAGGCTGTTGAAAAACACATGCAGACTTTCACTCATCTTGAAAAGAAAAAACTACCATCTTTTCTTGACTGGTTTGGTTGGTGCACTTGGGATGCTTTCTATACCGATGTCACTGCTGAGGGTGTTGAGGAAGGCCTCAAAAGCCTATCAGAAGGGGGTACACCTCCAAGGTTCCTCGTCATAGATGATGGTTGGCAACAGATCGAAAGCAAACCAAATGACTCTGATTCGGTCATACAAGAAGGAGTTCAGTTCGCTAGAAGATTGACTGGCATAAAAGAGAATACTAAATTTCAAAAACGTGGACCCAACAATGAACCAAACTCTGGCCTGAAACATGTTGTAGAAGAATCAAAACACCGCCACAATGTTAAATACGTATATTTATGGCATGCTCTGGCTGGATATTGGGGAGGAGTGAAGCCAGCGGCAACTGGCATGGAAAAGTACGAGACAGCCTTGGCATACCCAGTACAATGTCATGGTATACTAGGTAACCAATCAGACATCGTCATGGACAGCTTGTCCGTACATGGCTTAGGATTAGTACACCCAAAGAAGGTTTTCGATTTCTACAATGAGCTTCATGCATACCTAGCTTCGTGCGGAGTAGATGGAGTCAAAGTGGATGTACAGAACATAATTGAAACCCTAGGCTCTGGTTATGGAGGCAGAGTATCCCTCACGCGCAGCTATGTCCAGGCACTTGAGGCCTCCATTGCTCTTAACTTTACTGATAATGGCTGCATTGCCTGTATGTGTCATAATACTGATGGTATTTATAATTCCAAGCAAACCGCAGTTGTGAGAGCTTCGGATGATTTTTACCCGCACGATCCTACTTCTCACTCTGTCCATATTTCATCTGTGGCCTATAACTCTCTTTTCCTCGGAGAGTTTATGCAGCCTGACTGGGATATGTTTCATAGCTTACATCCCGCAGCAGAGTATCATGCTGCAGCTCGGGCAATTGGTGGATGTGCTATTTACGTTAGTGATAAGCCAGGACAACACGGTTTTGAGCTTCTAAAGAAGCTGGTTCTGCCTGATGGATCAGTCCTGCGAGCTCAATTACCTGGGAGGCCCACCATTGATTCTCTCTTTGTGGATCCAGCAAGAGATGGGACTAGCTTGCTGAAAATATGGAACATGAACAAGTGTAGTGGAGTGGTAGGGGTTATTAATTGCCAAGGTGCTGGTTGGTGCAAGGTTCAGAAGAAGACACGTGTCCATGATGCATCTCCTGCTACTCTTACTGGCTCTGTTTCTGCCTCTGATGTTGACCTCCTCCCTCAAGTTGCTGGTTATGATTGGGATGGCCACACCATTGTATATGCCTTCAGATCAGGGGAAGTTATTAAGGTCCCAAAAGGGGCTTCAGTTCCAGTGACACTTAAAGGTCAGGAGTATGAACTTTTCCATTTCTGCCCAGTCAAAGAAATTGCAGGAGGTGTTTCATTTGCTGCAATAGGGCTAATGGATATGTTCAACAGTGGAGGAGCAGTGGGGCAGATTGAGATCCAAAAAGGACCATCAGGAAAATCAGAAGCAGCAAGTATAAGACTGAGTGTGAAGGGAAGTGGGAGATTTGGAGTGTATTTGTCGCAGAGGCCATGCAAGTGTATGGTAGGTGACACAGAAACAGAATTCAACTATGAGCAAGCAAGTGGGTTGATGACCTTCATCGTACCAGTTGCTGCAGAGGAGATGTACAGATGCCTTATTCACATGCAAGTTTGA 2247 0.4606 MTVTPDIFINDGNLVVHGKNILTGVPDNILLTPEPGDGLVSGAFLGATSSKSKSLHVFPLGVLEGHRFMCCFRFKLWWMTNRMGTCGKDVPLETQFMLVESREEHSRTIYIVLLPLLEGQFRAVLQGNPKNELEICLESGDDTVETDQGHHLVYMHAGTNPFEVINHSVKAVEKHMQTFTHLEKKKLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLVIDDGWQQIESKPNDSDSVIQEGVQFARRLTGIKENTKFQKRGPNNEPNSGLKHVVEESKHRHNVKYVYLWHALAGYWGGVKPAATGMEKYETALAYPVQCHGILGNQSDIVMDSLSVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGSGYGGRVSLTRSYVQALEASIALNFTDNGCIACMCHNTDGIYNSKQTAVVRASDDFYPHDPTSHSVHISSVAYNSLFLGEFMQPDWDMFHSLHPAAEYHAAARAIGGCAIYVSDKPGQHGFELLKKLVLPDGSVLRAQLPGRPTIDSLFVDPARDGTSLLKIWNMNKCSGVVGVINCQGAGWCKVQKKTRVHDASPATLTGSVSASDVDLLPQVAGYDWDGHTIVYAFRSGEVIKVPKGASVPVTLKGQEYELFHFCPVKEIAGGVSFAAIGLMDMFNSGGAVGQIEIQKGPSGKSEAASIRLSVKGSGRFGVYLSQRPCKCMVGDTETEFNYEQASGLMTFIVPVAAEEMYRCLIHMQV 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01956 748 Gene3D Aldolase class I 192 507 IPR013785 -
Accr5g01956 748 PANTHER - 1 738 IPR008811 -
Accr5g01956 748 Pfam Raffinose synthase or seed imbibition protein Sip1 9 731 IPR008811 -
Accr5g01956 748 SUPERFAMILY (Trans)glycosidases 190 520 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01956 Accr-Chr5 45845682 45849121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01956 1 551 Glycoside Hydrolase AT3G57520 77.199 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01956 K06617 - tcc:18598978 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02597 2 61567232 61570396 Accr5g01956 5 45845682 45849121 CCT
Accr5g01956 5 45845682 45849121 Accr5g01956 5 45845682 45849121 ECH