Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02597 ATGCATGCTGGAGCAAACCCCTTTGAAGTCATCAAACAAGCTGTCAAGGCTCTAGAAAAACACATGAACACATTCCTTCATCGCGAGAAGAAAAGATTGCCATCTTTTCTCGAATGGTTTGGCTGGTGCACATGGGATGCTTTCTATATTGATGTCACAGCAGAGGGTGTTGAGGAAGGCCTGAAAAGCTTATCAGAGGGTGGCACACCTCCACGCTTCCTTATCATAGATGATGGCTGGCAACAAATTGAAAGTAAAGCAAAGGACCCGGACTGTGTCATTCAAGAAGGAGCACAGTATGCCACATGGTTGACTGGTATAAAAGAAAACGCTAAATTTCAGAATAATGAACAGAATTCAGGCCTGAAGCATGTAGTAGATGAAGCGAAGCAACATCACAATGTGAAATATGTATATGTATGGCATGCTCTAGCTGGTTATTGGGGCGGAGTGAAGCCAGCAGCCAGTGGCATGGAGCATTATGACACTGCCTTAGCATACCCGGTACATTCTCCTGGCGTACTTGGAAACCAACCAGACATTGTCACGGACAGCTTGACTGTACATGGCTTGGGTCTAGTGCATCCCAAGAAGGTTTATAACTTCTACGATGAGCTTCATGCTTACTTGAATTCATGTGGAGTGGATGGAGTAAAAGTTGATGTTCAGAATATCATCGAAACTCTTGGGGCTGGACATGGTGGCAGAGTTTCACTCACACGCAGCTACCATCAGGCCCTTGAGGCCTCTGTGGCTCGTAATTTCCCTGATAATGGTTGTATTGCTTGTATGTGTCACAACACTGATGGGATATATAGTGCTAAGCAGACTGCTGTTGCAAGAGTGTCTGATGACTTTTACCCACGCGATCCTGCTTCCCACACTATCCATATATCTTCCGTGGCATACAACACACTATTCCTTGGAGAATTCATGCAGCCGGACTGGGATATGTTCCATAGTTTACACCCAGCAGCAGAGTACCATGCTGCAGCTCGAGCAGTTGGTGGATGTGCAATTTATGTCAGTGATAAACCAGGCAACCACAATTTTGAACTTCTCAGGAAGCTGGTTCTGTCTGATGGATCAGTTCTTCGGGCTCAACTACCAGGCAGGCCCACTCGTGATTCTCTCTTTGCTGATCCAACTAGAGATGGGACTAGCTTGCTCAAAATTTGGAACTTGAACAAATGCTCTGGAGTGGTTGGGATATTTAACTGTCAAGGTGCTGGTTGGTGCAAGGTAGAGAAGAAGACCCGGGTCCATGATGCATCTCCTGGTACACTCACAGGTTCTGTTCGTGCTTCTGATGTTGATCTCATCACCCAAGTGGCTGGTGGCGATTGGGATGGCAACACTATTGCCTATTCCTACAAATCAGGTGAGGTGATTAGGCTACCAAAAGATGCTTCAGTGCCAGTGACGTTGCAAGTTTTGGAGTATGAACTATTCCATTTCTCTCCTGTGAAGAAAATTGCTTCAAGTATTTTGTTTGCAGCAATAGGGCTATTGGACATGTTCAACACTGGAGGAGCCGTTGAGGAGGTTGAAATCCACAAAGCTAGTGACAAAGAAGAACGACTATTTGATGGTGGGGTTCAATCTGAGCCGACCACTTCTCCCAGTTCAAACCGATCAGCAACGGCAACTATTGTCCTCAAAGTGAGAGGAAGTGGCAGATTCGGAGCGTACTTGTCCCAGCGCCCATTGAAGTGTGTTGTGGGTGAGGCTGAAACCGATTTCAACTATGACTCGGCCACTGGGCTGGTCACTCTCACCATCCCACTTCCTTCTGATGAAATGTACAGATGGCCCATACAAATCCAAGTCTAA 1833 0.4632 MHAGANPFEVIKQAVKALEKHMNTFLHREKKRLPSFLEWFGWCTWDAFYIDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIESKAKDPDCVIQEGAQYATWLTGIKENAKFQNNEQNSGLKHVVDEAKQHHNVKYVYVWHALAGYWGGVKPAASGMEHYDTALAYPVHSPGVLGNQPDIVTDSLTVHGLGLVHPKKVYNFYDELHAYLNSCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASVARNFPDNGCIACMCHNTDGIYSAKQTAVARVSDDFYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHAAARAVGGCAIYVSDKPGNHNFELLRKLVLSDGSVLRAQLPGRPTRDSLFADPTRDGTSLLKIWNLNKCSGVVGIFNCQGAGWCKVEKKTRVHDASPGTLTGSVRASDVDLITQVAGGDWDGNTIAYSYKSGEVIRLPKDASVPVTLQVLEYELFHFSPVKKIASSILFAAIGLLDMFNTGGAVEEVEIHKASDKEERLFDGGVQSEPTTSPSSNRSATATIVLKVRGSGRFGAYLSQRPLKCVVGEAETDFNYDSATGLVTLTIPLPSDEMYRWPIQIQV 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02597 610 Pfam Raffinose synthase or seed imbibition protein Sip1 1 593 IPR008811 -
Accr2g02597 610 SUPERFAMILY (Trans)glycosidases 31 356 IPR017853 -
Accr2g02597 610 Gene3D Aldolase class I 38 349 IPR013785 -
Accr2g02597 610 PANTHER - 1 606 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02597 Accr-Chr2 61567232 61570396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02597 3 609 Glycoside Hydrolase AT1G55740 56.981 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02597 K06617 - tcc:18598978 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02597 2 61567232 61570396 Accr5g01956 5 45845682 45849121 CCT
Accr2g02597 2 61567232 61570396 Accr2g02597 2 61567232 61570396 ECH