Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01798 ATGGTGGAGCTGTCCTTTGTCTCTAAAGCGCGGTCAGCTTTCCATTCAGCGGCTGCGAAAGCCGAGCGGGTTCTTGTGGACTTGAAATCGGAGCGAGGTCCTGACAAAGAATCGCCCGATAGATTGACTGGGAATCCAGAAGATGAAGCTCATCAGAAAGAGGGTGATTCAAAGCTTGACAGTGAATTGAGGCATATGAAGTGGAGGCCTGCATATAGAGGAATAAAGCAGGATTGGCAAGATAGGATTAAGAACATTCGAATAAGGAGAAAAGAAGTTGAAGAGATGGATGAACTCAGGGTGAGGGATATAACCATGGATGTTCCATTTTATGAAGAAAATTTGTACAACAAGAAAAAATATGATCTTGAGACCAAGGTTTCAGAAGCAGTTCCGACGGTTGAAATCTTAACTGCTGCAACTATAGATCCTGTTTGTCCATCATCTGTAATTAATGATTCCATTCCCCCATCATCTGTACTGAAGCAATTGGCTCTGGCTGTTGAGGCCGGAAGGAAAACAAAATCAATGGAAGATTTTATAGCTTCAACGGGAGGTTCTTCACCTGTTCATGATAGGGCAGGCTTAAGGCTCTCTGCAGTGAAGGCATTAATTTTGCGTGAAAAGGAGGATAAGCTTAATCTCAGTGATGATGAGAAAGTTTTTTGTTTGATTAATGCTCTGTTTGATCCAGAGGAGAAGTTTTTCAAAAGGAAGATTAACTATGGTTCAGAGGAAACTGACTTATCATCATTTTCAAGAGATATTCATGGAGCTCCTCTTGAAAGCCTTGTTGTCAAGCTGGCTGAAGTCATCGGAAACTTCAAGGACCTTCGAGAAATGGCTCTGTTTTGGTGTAGATTTGTTGTTGAACTGAGGAAACTTTGGTCTGAGGAGCAAGATTTACCCAGAATCCCCTTGGATGAGATTCCAGATTTGAAATCATGCCTCCTATATCAACAACTACAAGTAATAAATTGTTGTATCTCCCGGAAAAGGCACCGTGTTGTTGCTACTGAATCTATGAACTCTATGTTGCTAAAAGCCAGTTCTAATATTGATGAGTTAGCTGATTATAGTGACAACATTACTTCAAGCCCAATACGGTATGCTAGATTAAGTACTGGGGATTTTGCTGTTCGACTTGGTGCTGATTGCCCTGCTGGAGATCTGATGTTGTTGGAAACTGGCGAGCCCGTTTATTCTCCTGTTACCCAGGGAGGACCCCTGCTTACAGAAGATCTGATTGACGAAACAGAGGAGTCAGTGCTGCAGACAAGAAGTTTTGGTGCTGCGTGCTCTCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCAGGCTGTATTATGGAAGACTTTGTGAGATGGTATTCTCCTCCTGATTGGAATGAAAGGGAGCCAAGTACAGAGGCCCAAGAATCTTTAGATGGCAGTGATTCATTGTCTAACAGAGGTTCTCTAAGTCTGCGGATGCAAAAAGAAGGTAATTTATGGCGTGAATATTGGGAAGCAGCTGAACCAGTGCCAGCTGCTAAACAGGCACCTCTATTTGATGAGGATTTGGCAGTGGAGGGCATCCTGAATGCTCTTGAAGACATTCGGCCTTCAGAACTTTTTGAACAGTTGTTTATTTCTTTGCTTGGTTTAGGATTTGCCATCGCTGAACCTGTGCTATCTGGAAACAGTGACTTCTCAAAAGTGTTCTCTGACTGCAAGGAGTACATTATAATCACCTGCCAAGGCAACAATTGGAGTGAGAAAATTGATGACCTTTTCCAGGTATATGAATCCGTGGAGGCAATGTTACTGAATCCTGAGGAAGTACTGAGGATGATGAAGCAGACCAAAGAACCAACCATCATAACTGGTGAACTCAAGGATCGGTTTAAGAAGCTCAGCCTTAAGTTTGGTGGAAAAGATAGATTCTTAAGAAGGGCAATCCCCAAAGACAAGATAAACAATGAAGAGAATCCAATCCGACAGTCATTTTCAAATTTCTTTGACAGCAAAACATCTTTATTTTCAAAGAAGCCCAAGCCTGCAGTGACATGCGCTGCTGACAACCCTCCCTGTCTTGAAAGTGATTGGACTTTTCTCTAG 2106 0.4259 MVELSFVSKARSAFHSAAAKAERVLVDLKSERGPDKESPDRLTGNPEDEAHQKEGDSKLDSELRHMKWRPAYRGIKQDWQDRIKNIRIRRKEVEEMDELRVRDITMDVPFYEENLYNKKKYDLETKVSEAVPTVEILTAATIDPVCPSSVINDSIPPSSVLKQLALAVEAGRKTKSMEDFIASTGGSSPVHDRAGLRLSAVKALILREKEDKLNLSDDEKVFCLINALFDPEEKFFKRKINYGSEETDLSSFSRDIHGAPLESLVVKLAEVIGNFKDLREMALFWCRFVVELRKLWSEEQDLPRIPLDEIPDLKSCLLYQQLQVINCCISRKRHRVVATESMNSMLLKASSNIDELADYSDNITSSPIRYARLSTGDFAVRLGADCPAGDLMLLETGEPVYSPVTQGGPLLTEDLIDETEESVLQTRSFGAACSQLLSDMQAFKAANPGCIMEDFVRWYSPPDWNEREPSTEAQESLDGSDSLSNRGSLSLRMQKEGNLWREYWEAAEPVPAAKQAPLFDEDLAVEGILNALEDIRPSELFEQLFISLLGLGFAIAEPVLSGNSDFSKVFSDCKEYIIITCQGNNWSEKIDDLFQVYESVEAMLLNPEEVLRMMKQTKEPTIITGELKDRFKKLSLKFGGKDRFLRRAIPKDKINNEENPIRQSFSNFFDSKTSLFSKKPKPAVTCAADNPPCLESDWTFL 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01798 701 Coils Coil 76 96 - -
Accr4g01798 701 MobiDBLite consensus disorder prediction 463 487 - -
Accr4g01798 701 MobiDBLite consensus disorder prediction 26 61 - -
Accr4g01798 701 Pfam Rab3 GTPase-activating protein catalytic subunit 380 533 IPR026147 -
Accr4g01798 701 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 66 683 IPR045700 GO:0005096|GO:0043547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01798 Accr-Chr4 19325908 19332474 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01798 K18270 - gmx:100818643 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01798 4 19325908 19332474 Accr3g01996 3 29873844 29881254 CCT
Accr4g01798 4 19325908 19332474 Accr4g01798 4 19325908 19332474 ECH