Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01996 ATGGAGACGCTCTCTTTTGTTTCCAAAGCGAGGACTGCGCTTCATTCTGCGGCAGCAAAAGCCGAACGCGTTCTATCGGACTTGAAATCTGATCGAGATCCTGATAAACAATCGCCTAACAACTTGACAAGCGAAGAAAAAGACGAATCTCCTCGGATTGAAGGCGAGTCAAAGCTGCACAGCGATTTGAAAAAGTGGAGACCTCCACACATAAGCATAAAGCAGGATTGGCAAGATAAAATAAAAAATATTCGAATAGGGAGAAAGGAGGTTGAAGATACAGATAAAGTTGGAGATACAGCGATGACTTTTCCAATCTATGATGAAAATCTATACATCCTGAATATGAAAAATGATATTGAGACCAAGGCTTCTGAAGCAACACCAACCGTTGAAGGCTTGATTGCTGCAACAAAGGACCCCATTCCTCCATCATCCGTGCTGAGGCAGTTGGCAGTAGCTGTGGAGGATGGGAAGAGAGCAAGGTCAGTTAAAGATTTTACAGCTTCATCAGCAAATTCTTCTCCCGCTGGAGACAAAGGGGGCTTAAGTCTCCAAGCTGTGAAGGCCTTAGTGCTAGGTGGAAAGGATGACAAAGTTCCCATTGACTTTACTAAGGATGAAAAATTTGGTTTTTTGATTAATTCTCTGTTTGATCCAGAGGGAGAATTCCTCAAAAGGAAGATCAACTCTAATTCAGAGGAAAATTCCATAGCATCTTTGGCAAGAGATATTCATGGTGCTCCTCCTGAAAGCATAGTTGTTAAGCTAGCTGAAATCATTGGAAACTTCAGATGCCTTCAAAAAATGGCTTTGTTTTGGTGCAGGGTTGTTGTTGAACTGAAAAAACTTTGGTCTGAGGAGCAACATATACCTGGAGTGCCCCTGGATGTGATTCCAGATCTTAAGTTGTGTCTTCTATATCAACAATTTCAAGTAATTAATTGTTGCATCTCTAGGAAAAGGCGCCGATATATTGCCACTGAATCTCTGGACTCATTGATGGATGGCAGTTCAATTACTAAAGAATCAATGGACCATCATGATAGCATTCCTAAAGCCCCTGTTTTATATGCTAGACAAAATACAGGAGAGCTTGTTATTCGACTTGGTGCTGATTGCCCATCAGGGGATCTGACGTTGCTAGAAACTGGCGAGCCTGTGTACTCTCCGGTCATGCAGGAAGGACCTTTGCTTACAGAAGATCTAATCAAAGAAACAGAGGAGTTTGTGCTACGGACTGGGAGTGTTGGTGCTGGGTGCTCTCAACTTCTCTCAGATATGCAGGCTTTCAAGGCTGCCAACCCTGGTTGTATTTTGGAAGATTTTGTGAGATGGCACTCTCCCCCTGATTGGTCAGAATGTGAACAAGATACTGAGGCTAAAGATTCTTCTGATGGTGGTGACTGTGGTGAGTCATTGTGCACCAGAGGTCAGCTAAGTCAGCGAATGCTAAAAGAAGGTAATTTGTGGCGTGAACTCTGGGCTACATCTAAACCTGTACCAGCTGTTAAACAGACACCTCTATTTGATGAGGATTTGGCAGTGGAGGGCATCCTACATGCTTTTGAGGACATTCAGCCTTCTGAACTTTTTAAACAATTGTTTGTTTCTTTGCTTGGTTTAGGAGTTACAATAGCAGAGCCTTTGCTGTCTGGTAGCAGTGATTTCTCAAAGTTGTTCTCCGACTGCAAGGAGTACATAGTTGTCAGCTGTCAAAGCAGCAGTTGGAGTGAGAGACTTGATGAACTTTGCCAGGTATATCAAACTGTGGAAACAATGTTAACAAATCCTGAGGAAGCACTAATGATGATCAACCAGGCAGAAGAATCAGCAAAAACTAGCGGCGAACTGAAGCGTCGGTTCAAGGGGCTAAACTTTATCTTTCGTGGCAAAGATAAACCTGGGAGAAAACCTGGATCTGAAGACTTGGTAGACTCTGAAGACAACTCAATTCGGCAATCCTTCTCAAGTTTCTTCGACAGCAAGTCATCTGTATTTTCAAAGAAATCTTCTAAATTCAAAGACATTTCCCCAGGAGGGAAATCTCCCACTCCTGAAGATAATCAGACAATCGTTTCGGCAAAGCTCTCATGA 2097 0.4287 METLSFVSKARTALHSAAAKAERVLSDLKSDRDPDKQSPNNLTSEEKDESPRIEGESKLHSDLKKWRPPHISIKQDWQDKIKNIRIGRKEVEDTDKVGDTAMTFPIYDENLYILNMKNDIETKASEATPTVEGLIAATKDPIPPSSVLRQLAVAVEDGKRARSVKDFTASSANSSPAGDKGGLSLQAVKALVLGGKDDKVPIDFTKDEKFGFLINSLFDPEGEFLKRKINSNSEENSIASLARDIHGAPPESIVVKLAEIIGNFRCLQKMALFWCRVVVELKKLWSEEQHIPGVPLDVIPDLKLCLLYQQFQVINCCISRKRRRYIATESLDSLMDGSSITKESMDHHDSIPKAPVLYARQNTGELVIRLGADCPSGDLTLLETGEPVYSPVMQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWSECEQDTEAKDSSDGGDCGESLCTRGQLSQRMLKEGNLWRELWATSKPVPAVKQTPLFDEDLAVEGILHAFEDIQPSELFKQLFVSLLGLGVTIAEPLLSGSSDFSKLFSDCKEYIVVSCQSSSWSERLDELCQVYQTVETMLTNPEEALMMINQAEESAKTSGELKRRFKGLNFIFRGKDKPGRKPGSEDLVDSEDNSIRQSFSSFFDSKSSVFSKKSSKFKDISPGGKSPTPEDNQTIVSAKLS 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01996 698 MobiDBLite consensus disorder prediction 631 649 - -
Accr3g01996 698 Pfam Rab3 GTPase-activating protein catalytic subunit 369 524 IPR026147 -
Accr3g01996 698 MobiDBLite consensus disorder prediction 662 698 - -
Accr3g01996 698 MobiDBLite consensus disorder prediction 683 698 - -
Accr3g01996 698 MobiDBLite consensus disorder prediction 22 65 - -
Accr3g01996 698 MobiDBLite consensus disorder prediction 20 65 - -
Accr3g01996 698 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 72 678 IPR045700 GO:0005096|GO:0043547
Accr3g01996 698 MobiDBLite consensus disorder prediction 631 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01996 Accr-Chr3 29873844 29881254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01996 K18270 - gmx:100818643 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01798 4 19325908 19332474 Accr3g01996 3 29873844 29881254 CCT
Accr3g01996 3 29873844 29881254 Accr3g01996 3 29873844 29881254 ECH