Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01071 ATGCAGGGAATCTTGCGGAAAGGCGCTGCTAATAAAGTCGACGGTGGTAAAGATAGAATATCGGCATTGCAACAAGATATTCTTGAGCTGAAAAAGAAGCTTAGACATGAAGAGAACATCCACAGAGCATTGGAGAGGGCTTTTAACAGACCTTTGGGAGCTCTGCCTCGTCTTCCTCCGTATCTCCCCCCCTGCATACTGGCACTTCTGGCTGAAGTAGCAGTTCTGGAAGAGGAAATTGTTAGGCTTGAAGAGCAGGTAGTACAATCCAGGCAGGACTTGTACCAGGAAGCTGTCTACTTGTCATCTTCCAAGAGAAGAATCCAGCTTTCCGCTAATGTAAACAATGCAAATTCAGTTGAAAGCCCAAGAAAGGTCAAATTGAAGACTTCTTCCCATACAATCAATAACCCAAAAACATCTAAAACTAGGCTTACGACAACATCACTCGAGAATCGGCAAGGAAAGGAGAATGAATCCTGCACTAATTCTTTCAAGAGAAGCAAGCATTTTTCATGTAACAACCAAACAACTAAAATTCCAATCAAGAAACTTTCAACTGACAATAAATCTGGGCAGAAGTTCTGGGATCCTCATAAGAGGCAGCAAGAATTAAGGGTGAAAAACAAATCAATTGCAGAAGTAGGGAATCCTAGTCCAGATGAACAAGCACTGGGAGATGACAGCCCTAATATTATTTCTGAAAATATTTTGAAGTGCTTATCAACCATCCTCATGAGAATGAGTTCAGTGAAGAATCCAGGTCCTGCAGATGACATGCCATCGTTATTGGCTCTCAAAACTCACAACTACAATGAAGGATGGGATCCTTGTGGTACCTGTTTGGGATTTGAGAAGCAGGGTATTGGTCCATACAATCAAATATGTACAATTGAAGCCACATCTTTCAATCCAAAACGAACCGGGAATTCTTTGATTTTGTTGTGTAGATTAAAAATTCTTTTCAGGAAACTTGCCGCTGTCAAGTTAGAAAACCTCAACCACCAGGAGAAACTTGCATTCTGGATCAACATCTATAATTCCTGTATGATGAACGCCTTCATAGAGAATGGCATTCCTGAGAGTCCTGAAATGGTTGTTTCACTGATGCGGAAGGCAACAATAAATGTGGGTGGACACTTGCTAAGGGCAAACACTATCGAACATTTCATCCTGAGACTTCCCTACCAATGGAAATTTACGTTTCTGAAGGGAGCAAAGAATCATGAAATGACAGCAAGAAGCCTATTTGGGCTGGAATTGTCAGAACCTTTAGTGACATTTGCGCTCTCCTGTGGAACTTGGTCCTCTCCTGCAGTGAGAATTTATACCGCGTCACAAGTTGAGAACCAGCTGGAAGTTGCAAAAAGAGAGTACTTGCAGGCTGCAATATATATTTCAACGTCCAAGATTGCTATCCCAAAACTTCTTGATTGGTATTTGCTGGATTTTGCAAAAGACTTGGAATCAATGCTGGATTGGATCTGCCTGCAATTACCAAGTGAACTAGGGAAAGAAACCATCAAGTTCATTGAGAAAAGAAAAACCCAGCCCCTCCGTCAATTTGTACAAATCATACCATATGACTTCACTTTTAGATACCTTTTATGTACATGA 1617 0.4125 MQGILRKGAANKVDGGKDRISALQQDILELKKKLRHEENIHRALERAFNRPLGALPRLPPYLPPCILALLAEVAVLEEEIVRLEEQVVQSRQDLYQEAVYLSSSKRRIQLSANVNNANSVESPRKVKLKTSSHTINNPKTSKTRLTTTSLENRQGKENESCTNSFKRSKHFSCNNQTTKIPIKKLSTDNKSGQKFWDPHKRQQELRVKNKSIAEVGNPSPDEQALGDDSPNIISENILKCLSTILMRMSSVKNPGPADDMPSLLALKTHNYNEGWDPCGTCLGFEKQGIGPYNQICTIEATSFNPKRTGNSLILLCRLKILFRKLAAVKLENLNHQEKLAFWINIYNSCMMNAFIENGIPESPEMVVSLMRKATINVGGHLLRANTIEHFILRLPYQWKFTFLKGAKNHEMTARSLFGLELSEPLVTFALSCGTWSSPAVRIYTASQVENQLEVAKREYLQAAIYISTSKIAIPKLLDWYLLDFAKDLESMLDWICLQLPSELGKETIKFIEKRKTQPLRQFVQIIPYDFTFRYLLCT 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01071 538 PANTHER EXPRESSED PROTEIN 14 537 - -
Accr4g01071 538 Pfam Leucine-zipper of ternary complex factor MIP1 18 97 IPR025757 -
Accr4g01071 538 Coils Coil 66 93 - -
Accr4g01071 538 Pfam Protein of unknown function, DUF547 331 460 IPR006869 -
Accr4g01071 538 Coils Coil 13 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01071 Accr-Chr4 10187458 10190299 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01071 - - gmx:100807554 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00227 3 2432665 2435822 Accr4g01071 4 10187458 10190299 CCT
Accr4g01071 4 10187458 10190299 Accr4g01071 4 10187458 10190299 ECH