Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00227 ATGAATACCAGAGTCGGGACACGACTTCACCCTGCCAAAGCTCCTATGACACGTGAAAAAGCAGAGATGCAGGGAAGAGCAGCTACAGGTGGAAAAACATCGAGTAGAGATAGGAAAATGGCTCTGCAACAAGATGTTGATAAGTTGAAGAAGAAGCTCAGGCATGAAGAGAACATCCACAGGGCATTGGAGAGGGCTTTAAACCGGCCTTTGGGAGCTCTGCCTCGTCTTCCTCCTTTTTTGCCCCCTTACATACTAGCGTTGCTGGCGGAAGTGGCGGTTCTGGAAGAGGAAATCGTGAGGCTTGAAGAGCAGGTCGTGGATTTGAGACAGGACATGTACGAGGAAGCTGTGCTCATGTCATCTTCTAAAAGAAGAATGGAGCATTTAACTCATTCTAACCACGCAAATTCAATTGGAAGTCTTGAGCCTGACAAATTGAAGTCAACAACGAATTCTGCTATAACACTTCCTGGGGATAAACTCGGAAAAGAAAACCAATCTCGTTCTAATTTTTCCAAGAGCAGCAATAAATCGAAACGTCCAGTCCAAAAGACTGCAATTGCAAAACTTCCCATTCACAATAAATCAGTGCAGAAACACAGAGTTCTTCCAATGAGACAGATATACATACCTGAGGAAAGGAGGAACGAAAAGCCAGTTGCAGAAATGATAAATCCGAGTGCAAGTGAAAAATCACCCGGTGATGAAAACCCGAATACAATATCCGAAAATATTGTGAAGTGTTTATCAAGCATTCTCTTGAGAATGAGTTCGGTGAAGAATACTGGGCCTGCAGATGATACATCATCCTTAAGGAATCTGAAACCTCTTAACTCTGTTGAAGGAGAAGAACCTTGGGATCCTTATGGTATCTGTTCTGAGTTTGGAAAGCGGGATATTGGTCCCTACAAGCAATTATGTGCAATTGAAGCTAAATCTTTCAATCCTAAAAGAACCGCAAATTCTCTGTTTTTACTGAGTCGATTGAAGCTTCTTCTTCGGAAACTTGCCTCTGTCAGCTTGGAAAACCTCAACTATCAGGAGAAGCTTGCATTCTGGATCAACATTTATAATTCCTGTATGATGAATGTATTCATAGAAAATGGCGTCCCAGAAAGTCCTGAAATGGTGGTTACATTGATGCGGAAGGCAACAATAAATGTGGGCGGATATATGCTAAGCGCAACCACCATAGAACATTGCATCCTGAGGCTTCCTTATCACTGGAAATTGGCATTTTCCAAGGGAGCGAATAAGAATCATGAAATCACAGCAAGGAGCACATTTGGACTGGAATTGACAGAGCCCCTAGTCACATTTGCACTCTCCTGTGGCACTTGGTCGTCTCCTGCAGTGAGAGTGTACTCGGCATCCCAGGTTGAGAACGAATTGGAAGTGGCAAAAAGAGAGTATTTGCAGGCAGCTATTGGAATTTCGACATCCAAGTTTGCAATTCCAAAACTGCTGAGTTGGTATTTGCTGGACTTTGCAAAAGACTTGGAGTCGTTGCTGGATTGGATTTGCCTCCAGTTGCCAAGTGAACTTGGGAAAGAAGCCATTAATTTCCTCGAGAAGAGAAAAACCGAGCCTCTCTCTCAATTTGTACAAATCCTGCCTTATGAGTTTACTTTTAGATACCTGATATGCACATGA 1656 0.4306 MNTRVGTRLHPAKAPMTREKAEMQGRAATGGKTSSRDRKMALQQDVDKLKKKLRHEENIHRALERALNRPLGALPRLPPFLPPYILALLAEVAVLEEEIVRLEEQVVDLRQDMYEEAVLMSSSKRRMEHLTHSNHANSIGSLEPDKLKSTTNSAITLPGDKLGKENQSRSNFSKSSNKSKRPVQKTAIAKLPIHNKSVQKHRVLPMRQIYIPEERRNEKPVAEMINPSASEKSPGDENPNTISENIVKCLSSILLRMSSVKNTGPADDTSSLRNLKPLNSVEGEEPWDPYGICSEFGKRDIGPYKQLCAIEAKSFNPKRTANSLFLLSRLKLLLRKLASVSLENLNYQEKLAFWINIYNSCMMNVFIENGVPESPEMVVTLMRKATINVGGYMLSATTIEHCILRLPYHWKLAFSKGANKNHEITARSTFGLELTEPLVTFALSCGTWSSPAVRVYSASQVENELEVAKREYLQAAIGISTSKFAIPKLLSWYLLDFAKDLESLLDWICLQLPSELGKEAINFLEKRKTEPLSQFVQILPYEFTFRYLICT 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00227 551 Coils Coil 32 66 - -
Accr3g00227 551 PANTHER EXPRESSED PROTEIN 24 549 - -
Accr3g00227 551 Pfam Protein of unknown function, DUF547 343 473 IPR006869 -
Accr3g00227 551 MobiDBLite consensus disorder prediction 133 183 - -
Accr3g00227 551 MobiDBLite consensus disorder prediction 133 184 - -
Accr3g00227 551 MobiDBLite consensus disorder prediction 218 241 - -
Accr3g00227 551 MobiDBLite consensus disorder prediction 1 41 - -
Accr3g00227 551 Coils Coil 85 112 - -
Accr3g00227 551 Pfam Leucine-zipper of ternary complex factor MIP1 35 116 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00227 Accr-Chr3 2432665 2435822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00227 - - gmx:100807554 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00227 3 2432665 2435822 Accr4g01071 4 10187458 10190299 CCT
Accr3g00227 3 2432665 2435822 Accr3g00227 3 2432665 2435822 ECH