Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00802 ATGGCTTCTTCCACCACCAAGCTCTGTGCCCCCATTTTGGTTCTTTACCTTCTTGCTTGCTCTTCCTTCACGGAAGCCTGCGGGTCAAATGCATGCAACCCCGCCAAGTGTCCCCTAGACACACTGAAGCTGGGAGTATGTGCTGACATCCTGGGCCTTGTAAACGTCGTCGTCGGGTCTCCTCCAACCAGCCATTGTTGCCCATTGCTAGCAGGTTTGGCTAATTTAGAGGCAGCTCTCTGCCTCTGCACAGCCATTAAGGCCAACGTTCTCGGTATCAACTTGAACGTACCTCTCAGCCTCAGCTTGATCCTTAGCTCTTGTCAAAAATCCGTTCCTTCTGGTTTTAAATGTCCCTAG 360 0.5139 MASSTTKLCAPILVLYLLACSSFTEACGSNACNPAKCPLDTLKLGVCADILGLVNVVVGSPPTSHCCPLLAGLANLEAALCLCTAIKANVLGINLNVPLSLSLILSSCQKSVPSGFKCP 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00802 119 Pfam Hydrophobic seed protein 37 119 IPR027923 -
Accr4g00802 119 SMART aai_6 37 118 IPR016140 -
Accr4g00802 119 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 40 119 IPR036312 -
Accr4g00802 119 PANTHER - 12 118 - -
Accr4g00802 119 Gene3D - 38 119 IPR036312 -
Accr4g00802 119 FunFam pEARLI1-like lipid transfer protein 1 35 119 - -
Accr4g00802 119 CDD HPS_like 34 118 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00802 Accr-Chr4 7611879 7612238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00802 33 119 Acyl Lipid Metabolism Gene Families AT4G22490 39.080 6.18e-16 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00802 - - mnt:21391864 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00768 3 8522174 8522575 Accr4g00802 4 7611879 7612238 CCT
Accr4g00802 4 7611879 7612238 Accr4g00802 4 7611879 7612238 ECH