Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00768 ATGGCTTCCCACAAGCTCTGTGCAATCATCTTCGTTCTCTCTCTCCTTGCCCACTCAACACTCATCACTGCCCACTACCCCAAACCACCATGTCCATCCACGCCCACCCCGACGCCCGTTCCCACACCACCAACGCCGGCGACGGACAAATGCCCAAAGGACACGTTGAAGCTGTCGTTGTGTGCGGATGTTCTGGGGCTTGTTAACGTTGTTGTGGGAACTCCATTGTCGGCTAAGTGTTGTGCATTGTTGGATGGATTGGTGGACTTGGAGGCAGCACTTTGTCTGTGCACAGCGATTAAGGCCAACTTGCTTGGAATCAACCTTAATGTCCCCGTCGCTCTCAGCTTAATCCTTAGTGCTTGTCAGAAGACAGTTCCTCCCGGTTTCCAATGTCCTTAG 402 0.5299 MASHKLCAIIFVLSLLAHSTLITAHYPKPPCPSTPTPTPVPTPPTPATDKCPKDTLKLSLCADVLGLVNVVVGTPLSAKCCALLDGLVDLEAALCLCTAIKANLLGINLNVPVALSLILSACQKTVPPGFQCP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00768 133 CDD HPS_like 49 132 IPR027923 -
Accr3g00768 133 Pfam Hydrophobic seed protein 51 133 IPR027923 -
Accr3g00768 133 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 54 133 IPR036312 -
Accr3g00768 133 Gene3D - 49 133 IPR036312 -
Accr3g00768 133 FunFam pEARLI1-like lipid transfer protein 1 49 133 - -
Accr3g00768 133 SMART aai_6 51 132 IPR016140 -
Accr3g00768 133 PANTHER - 7 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00768 Accr-Chr3 8522174 8522575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00768 44 133 Acyl Lipid Metabolism Gene Families AT4G22490 38.889 6.99e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00768 - - gmx:547594 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00768 3 8522174 8522575 Accr4g00802 4 7611879 7612238 CCT
Accr3g00768 3 8522174 8522575 Accr3g00768 3 8522174 8522575 ECH