Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00727 ATGGGAAGAGTGAGATATGGTGGGGCTATTGTGCCTTTGTTGTGTAGTGTGGTGTTGGTGGGGATGGTGAGCGGGATTGGTGTGAACTGGGGGACACAGGCAACACACCCATTGCCAGCATCAACAGTGGTAAAAATGCTTAAAGACAATGGAATTCAGAAGGTGAAGCTGTTTGATGCAGATTCAGATATTCTGGATGCTCTCAAGAAGTCAGGGATTCAAGTCATGGTAGGTATTCCAAATGACATGCTCGCTTCACTGGCCAACAGTGTCCAAGCTGCTGAAAAGTGGGTCTCCAAGAACGTTTCCTCTCACGTTTCTTCTGGTGGAGTAGACATCAGGTATGTTGCAGTGGGAAATGAACCTTTCTTGTCAACATATAACGGCACTTTTGTATCTACAACTCTTCCAGCTCTTCAGAACATCCAATCAGCTCTCATCAAATCTGGTTTGGGCAATCAGGTCAAGGTCACTATACCTCTAAACGCCGACGTGTATCAGAGTTCATCCGACAAGCCTTCCGACGGGGACTTCCGGCCGGATATCCATGACCTGATGCTGCTGATTGTCAAATTCTTGAGTGACAATGGAGCCCCATTTACAGTCAACATCTACCCATTCATTAGCCTGTACAAAGACTCAAACTTTCCAGTTGACTACGCCTTCTTCAACGGCTATCAGACCCCCATAAATGACAATGGAAAGATCTACGACAATGTGTTTGATGCCAACCATGACACGCTTGTTTGGGCATTGCAGAAAAATGGATTTGGAAACTTACCCATAATTGTGGGAGAGATTGGTTGGCCCACGGATGGAGACAGAAACGCAAATCTTCAGTATGCTCAGCGTTTCAACCAAGGCTTCATGTCTCGCTATATTGCAGGAAAAGGGACTCCAATGAGACCTGGTCCTGTAGATGCTTACCTGTTCAGCCTCATAGATGAAGATAATAAGAGCATTGAACCTGGCAACTTTGAACGTCATTGGGGTCTGTTTTACTTTGATGGTCAACCTAAGTACCAGCTTAATATTGGGTCGTCATCTAAAGGTTTAGTGGCTGCTAGTGGTGTGCATTATCTGGAGAAGAAGTGGTGTGTATTGAAGCCTACAGCGAACCTTAATGATCAGCAAGTGCCACCAAGTGTGGCTTATGCTTGTGCGAGAGCAGATTGTACTAGTCTTGGATACGGGACTTCTTGTGGGAATTTAGATACAAAGGGTAATATATCTTATGCATTTAACAGTTACTATCAGGTAAATGACCAGCTTGATAGTGCTTGCCAGTTCCCAGGCCTTTCCATTGTCACTAATCAAGACCCTTCATCTGGAGATTGCAAGTTCAGAATCATGATCCAGACAGATACTGCTAACCCAGATAGGAGGGTTGGGTCTTTGTCAATAGTGTTGTGTCTATTTTTGCTTTTTTACTTTCCTGTAATCTAA 1446 0.4447 MGRVRYGGAIVPLLCSVVLVGMVSGIGVNWGTQATHPLPASTVVKMLKDNGIQKVKLFDADSDILDALKKSGIQVMVGIPNDMLASLANSVQAAEKWVSKNVSSHVSSGGVDIRYVAVGNEPFLSTYNGTFVSTTLPALQNIQSALIKSGLGNQVKVTIPLNADVYQSSSDKPSDGDFRPDIHDLMLLIVKFLSDNGAPFTVNIYPFISLYKDSNFPVDYAFFNGYQTPINDNGKIYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSRYIAGKGTPMRPGPVDAYLFSLIDEDNKSIEPGNFERHWGLFYFDGQPKYQLNIGSSSKGLVAASGVHYLEKKWCVLKPTANLNDQQVPPSVAYACARADCTSLGYGTSCGNLDTKGNISYAFNSYYQVNDQLDSACQFPGLSIVTNQDPSSGDCKFRIMIQTDTANPDRRVGSLSIVLCLFLLFYFPVI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00727 481 Gene3D - 360 459 - -
Accr4g00727 481 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Accr4g00727 481 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Accr4g00727 481 Pfam Glycosyl hydrolases family 17 26 344 IPR000490 GO:0004553|GO:0005975
Accr4g00727 481 FunFam Glucan endo-1,3-beta-glucosidase 5 25 351 - -
Accr4g00727 481 FunFam Glucan endo-1,3-beta-glucosidase 8 360 457 - -
Accr4g00727 481 Gene3D Glycosidases 25 351 - -
Accr4g00727 481 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 437 IPR044965 GO:0004553|GO:0005975
Accr4g00727 481 SMART X8_cls 364 448 IPR012946 -
Accr4g00727 481 Pfam X8 domain 364 433 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00727 Accr-Chr4 6968880 6970530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00727 10 476 Glycoside Hydrolase AT4G31140 70.526 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00727 K19893 - gmx:100796552 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00727 4 6968880 6970530 Accr3g00680 3 7618377 7621715 CCT