Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00680 ATGGCAGGCGAGAAACGCAGTAGGCTTCTTCTTGCTCCTTTAATTTTTCTCTGTGTACTGTTGTTAGTGGGTTCAACTAGTGGGATTGGTGTAAATTGGGGGACGCAGTCAACACACCCACTGGGAACATCGACCGTGGTGAAAATGCTAAAAGAAAATGGGATTCAGAAGATTAAGCTATTTGATGCCGATCCTAATATTTTAGATGGTTTCAAGAAGTCTGGGATTCAAGTGATGGTGGGTATTCCTAATGACATGCTTTATACTCTGGCTACCAATACGCAAGCTGCTGAAAAATGGGTTTCGAAAAATGTTTCTGCTCATCTCTCTTCTGGCGGAGTAGATATCAGGTATGTTGCAGTTGGGAATGAACCTTTCTTGTCAACTTTCAACGGCACTTTTGAAACCACAACTCTTCCAGCACTTCAAAATATACAGGCAGCTCTCACGAAAGCTGGTTTGAGCAACCGCGTTAAGGTCACTGTCCCTCTAAATGCAGATGTGTATTTGAGTTCATCCGATAAGCCTTCTGATGGTGATTTCCGGCCAAACATCCATGAACTAATGCTGCAGATTGTCAAGTTCTTGAGTGACAATGGAGCTCCTTTCACCGTCAACATCTACCCTTTCATCAGTCTCTATTTGGACTCCAATTTCCCGGTTGACTTTGCCTTCTTTGACGGCTCCCAGAGTTCCATCAATGACAATGGCAAAATCTATGACAATGTCTTTGATGCCAACCATGACACACTGGTCTGGGCATTGCAGAAGAATGGCTTTGGAAACTTGCCTATTATCATAGGAGAAATCGGGTGGCCAACCGATGGAGACCTACACGCGAATCTTCAGTATGCTCAGCGTTTCAACCAAGGCTTCATGTCTCGCTATCTCACTGGAAAAGGGACTCCAATGAGGCCTGGCCCTTTAGATGCGTACTTGTTTAGCCTAATCGATGAAGACGCAAAGAGCATTCAGCCAGGCAACTTTGAACGCCATTGGGGGTTGTTTTACTTAGACGGACAACCCAAGTACCAGCTTAATCTTGGGTCTACAAGAGGTTTAGTGGGTGCAAGTGGGGTTCATCATCTGGGTAAAAGATGGTGTATTATGAAACCAACTGCGAATCTGAATGATGATCAAGTGCCTCCAAGTGTGGCTTATGCTTGCCAAAATGCAGATTGTACAAGTCTTGGTTATGGGACTTCATGTGGGAATTTAGATGCTAGAGGTAATATTTCTTATGCTTTTAACAGCTACTTTCAAGTGATGGACCAGATGGAGAGTGCGTGCAAGTTCCCAGGTCTTTCTGTTGTCACTGATAACGATCCTTCTACGGGTACTTGCAAGTTCAGAACCATGATTGAGTCTGTTTCTGCCGAGAGACTTGCATCTATTAGAACCGTGCTCTTTGTTTTTCTCCTTTTCTCTCTTCTGTAA 1437 0.4405 MAGEKRSRLLLAPLIFLCVLLLVGSTSGIGVNWGTQSTHPLGTSTVVKMLKENGIQKIKLFDADPNILDGFKKSGIQVMVGIPNDMLYTLATNTQAAEKWVSKNVSAHLSSGGVDIRYVAVGNEPFLSTFNGTFETTTLPALQNIQAALTKAGLSNRVKVTVPLNADVYLSSSDKPSDGDFRPNIHELMLQIVKFLSDNGAPFTVNIYPFISLYLDSNFPVDFAFFDGSQSSINDNGKIYDNVFDANHDTLVWALQKNGFGNLPIIIGEIGWPTDGDLHANLQYAQRFNQGFMSRYLTGKGTPMRPGPLDAYLFSLIDEDAKSIQPGNFERHWGLFYLDGQPKYQLNLGSTRGLVGASGVHHLGKRWCIMKPTANLNDDQVPPSVAYACQNADCTSLGYGTSCGNLDARGNISYAFNSYFQVMDQMESACKFPGLSVVTDNDPSTGTCKFRTMIESVSAERLASIRTVLFVFLLFSLL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00680 478 FunFam Glucan endo-1,3-beta-glucosidase 5 28 353 - -
Accr3g00680 478 Pfam X8 domain 367 435 IPR012946 -
Accr3g00680 478 Gene3D Glycosidases 28 353 - -
Accr3g00680 478 Gene3D - 363 463 - -
Accr3g00680 478 FunFam Glucan endo-1,3-beta-glucosidase 8 362 459 - -
Accr3g00680 478 SMART X8_cls 366 450 IPR012946 -
Accr3g00680 478 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
Accr3g00680 478 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 439 IPR044965 GO:0004553|GO:0005975
Accr3g00680 478 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Accr3g00680 478 Pfam Glycosyl hydrolases family 17 29 347 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00680 Accr-Chr3 7618377 7621715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00680 15 477 Glycoside Hydrolase AT4G31140 68.085 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00680 K19893 - gmx:100796552 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00727 4 6968880 6970530 Accr3g00680 3 7618377 7621715 CCT