Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00452 ATGGCAGAAAAGGCCAAGAACAAGACGGAGAATGGAGTGGGTTGTGGTTTCATGGGGAGGATTTTCCATCTCACAAGCTGCATGTTCAGGAAATCATCTGTTTATTCACTACCCATGAAGGTGAACGATCAGAGCAAAACTGAATCCAAGAAGCCGCCAAATCTTGAATCCAAGGCTACTTCAACTCAGTCGCACAAACCGTCCAGCAAGAGCCCTTCCGATCATCGAACACCTCCTGCCATCAAGAATAAAAATCCGAGACCTTCGGACGCTGCAAGAACCCCAACATCATCCTGTGCCAATTCATTACAAACTAAGATTCAACAAAACCACAAGTTGAATAACAAGAGAATAACACAGAGGCAGCCTACTGAAAACTCGTTGGAGCTTGCGAGGCTAAGCACTCATTACCAACGGGAAAACGAGCATAAATCCCCCCTCAAACTTACTGGTAATTTGGTTGTAAATACCAGCCCAAGAACTAGAGCTAGGACCAGTGAAAATCTTCCCAAGAATAAAGATGTGATGAACTCATCACTCAAGTATCACACCAACACAAGTGTAACGGGGAATATTATAAGGAAGAGCACTGATAAGCTTGCGCAGTTTCGGAGTCCCAACAACAGAGTAGACCCTGAAGTGTTGAAGACAACGGGAAATGAAGCATATAAGCAAGGAAGATTTGACGAGGCTTTGTCTTTATATGAGCGAGCGATTGCTATTGATTCAAAAAAGGCAACGTTTCATTGCAATAAGAGTGCGGCTTTGATAGGATTAGGCCGTCTTCTGGAAGCAATTGTTGAGTGCCAGGAAGCTATCCGGCTGGAACCTTCTTATAAAAGACCCCACCACCGTTTGGCAACCATATATCTCAGATTCGGAGAAGCAGAGAAGGCACTAAGTTACAATGTCGCAACCCCATATTCTGATTCTGCACTCGCCTTCCAAGCTCTGTCTCTTCGCAACCACCTTCAAAAATGCATTGAAGCAAGGAAAATCAATGATTGGGATGCTATACTGAAGGAAACGCAATCTGCCATATCATTAGGCGCTGATTCAAGTCCTCAGGTTTATGCTTTACAAACAGAAGCCTTACTTAAGCTCTTCAGACATCAGGAGGCATATGCTACCTATGAGAAAATGCCCAAATTTGCTATTAATTGGTGCACCAAGTTGTTTGGTCTGGCTCGTAGTGCTTATCTGTTTATGATAGGCGCTCAGGCTTACTTGTCTGTTGGCAGGTTCGAGGATGCAGTGGCGGCAGCTGAGCAAGCAGCTAAACTTGATCCAAGTGACAAAGAGGTAAGCACAGTGGTCAAGAGGGCCAGAGCAATATCATCAGCCAGAATGAGTGGAAACTTACTGTTCAAGGCAACCAAATACACAGAATCATGTGCTGTGTACAACGAAGGACTAGAGCACGATCCATACAACTCTGTCCTGCTATGCAACAGAGCAGCATGTCGTTTTAAGCTGGGCCACTTTGAGAAAGCCATTGAAGATTGTAATGCAGCCCTTGCACTTCAGCCTAGTTATAGCAAGGCACGGTTAAGGAGGGCATATTGCATTGCCAAGTTGGAAAGATGGGAAGCCGCCATTCAAGATTATGAAATGCTACTGAGAGAGAAGCCAGGGGATGAGGAGGTGGGTAGGGCTCTGTTTGAGGCTCAGCTTCAGCTCAAGATGCTGCGTGGGGAAGATGTTAAGGACTTCAAATTTGGGTGTAATTTGGTTTTTGTATCGAGCAATGATCGGTTTCGACATTATGTAACCTCACCTGGTATGTCTGTGGTGCTATTTTGCAACAAGGCAACCCACAAGCAAGTATTGCTAGTGTTCGAGCAAACCTGCTGGAGATTTCCATCTGTTAATTTCCTCAAGGTAGAGATTGAAGACCACCCGTCCTTAGCAAAATCAGAAGGCGTGAATTCTGTGCCTGTGTTCAAAATATACAAGAATGGATCAAAGGTTAAGGAAATTCCAGGCAAAAATCATGAGTTGTTAGAAAGATCGGTTAAGTTGTACAGCAGTTGA 2034 0.4449 MAEKAKNKTENGVGCGFMGRIFHLTSCMFRKSSVYSLPMKVNDQSKTESKKPPNLESKATSTQSHKPSSKSPSDHRTPPAIKNKNPRPSDAARTPTSSCANSLQTKIQQNHKLNNKRITQRQPTENSLELARLSTHYQRENEHKSPLKLTGNLVVNTSPRTRARTSENLPKNKDVMNSSLKYHTNTSVTGNIIRKSTDKLAQFRSPNNRVDPEVLKTTGNEAYKQGRFDEALSLYERAIAIDSKKATFHCNKSAALIGLGRLLEAIVECQEAIRLEPSYKRPHHRLATIYLRFGEAEKALSYNVATPYSDSALAFQALSLRNHLQKCIEARKINDWDAILKETQSAISLGADSSPQVYALQTEALLKLFRHQEAYATYEKMPKFAINWCTKLFGLARSAYLFMIGAQAYLSVGRFEDAVAAAEQAAKLDPSDKEVSTVVKRARAISSARMSGNLLFKATKYTESCAVYNEGLEHDPYNSVLLCNRAACRFKLGHFEKAIEDCNAALALQPSYSKARLRRAYCIAKLERWEAAIQDYEMLLREKPGDEEVGRALFEAQLQLKMLRGEDVKDFKFGCNLVFVSSNDRFRHYVTSPGMSVVLFCNKATHKQVLLVFEQTCWRFPSVNFLKVEIEDHPSLAKSEGVNSVPVFKIYKNGSKVKEIPGKNHELLERSVKLYSS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00452 677 Pfam Tetratricopeptide repeat 481 512 IPR001440 GO:0005515
Accr4g00452 677 MobiDBLite consensus disorder prediction 54 78 - -
Accr4g00452 677 ProSiteProfiles TPR repeat profile. 212 245 IPR019734 GO:0005515
Accr4g00452 677 Pfam Thioredoxin 607 668 IPR013766 -
Accr4g00452 677 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 3 673 IPR044534 -
Accr4g00452 677 MobiDBLite consensus disorder prediction 89 127 - -
Accr4g00452 677 Pfam Tetratricopeptide repeat 406 478 - -
Accr4g00452 677 Gene3D Glutaredoxin 576 676 - -
Accr4g00452 677 SUPERFAMILY TPR-like 450 561 IPR011990 GO:0005515
Accr4g00452 677 SUPERFAMILY Thioredoxin-like 578 663 IPR036249 -
Accr4g00452 677 CDD TRX_family 586 662 - -
Accr4g00452 677 Gene3D Tetratricopeptide repeat domain 211 564 IPR011990 GO:0005515
Accr4g00452 677 ProSiteProfiles TPR repeat profile. 399 432 IPR019734 GO:0005515
Accr4g00452 677 SUPERFAMILY TPR-like 212 434 IPR011990 GO:0005515
Accr4g00452 677 MobiDBLite consensus disorder prediction 41 127 - -
Accr4g00452 677 Pfam TPR repeat 219 254 - -
Accr4g00452 677 SMART tpr_5 479 512 IPR019734 GO:0005515
Accr4g00452 677 SMART tpr_5 212 245 IPR019734 GO:0005515
Accr4g00452 677 SMART tpr_5 246 279 IPR019734 GO:0005515
Accr4g00452 677 SMART tpr_5 445 478 IPR019734 GO:0005515
Accr4g00452 677 SMART tpr_5 513 546 IPR019734 GO:0005515
Accr4g00452 677 SMART tpr_5 399 432 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00452 Accr-Chr4 4381765 4384592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00452 K09527 - gmx:100814381 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00381 3 4222850 4225405 Accr4g00452 4 4381765 4384592 CCT
Accr4g00452 4 4381765 4384592 Accr4g00452 4 4381765 4384592 ECH