Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00381 ATGGCATCGAAGGTCAAAACCATGGTGGAGAATGATGTGGGCTGCGGTTTTGTGAGGAGGTTATCCCTTCTCAGAAGCCCCCTTCTGAGAAAATCATCAGTCCATTCACTATCCTTGAAATCTGCCGACAATGTGCAGAGCAAGGACAGCATAAAGGATTCCAAAAAAACTCCAAATCATGAATCCAAGGGCGTGCGAAATATCCCCACCGAGTCCAACAAACCAGATTTGGATCAGAGGACTCCCAGAAAGAGCACCTCCGACCATCAGAATAGTCAAAACCGGAGACTTTCCGATGCTGCCAGAAGCTCAACATCATCCTCTGGTAATTCTCTGGTGCTTGCTAGGATAAGCACTACTCACCAGCGAGACAACGAGAATAAAGCCACAGTTAACTTGAAACTTACTGGGAATTTGCTTGGAAATAACAGCCCCAAAACTAGTGTTTCAAAGAAAGTTGAATCCGTTCCCAAGAATAAAGAGCTGAATTCTGTGACTAATTTTCACAATAACGCCGGGATGGGGAACATCATGAGGAAGAACAGCGACGAGCTTGCTCAACTTCGGAGACAGAGGATCCGAATAGACCCTGAAGTGCTGAAAACAGAGGGAAATGAAGCCTACAAACAGGGGAAATTCGAAGATGCTTTGAGTCTCTATGACAGAGCCATTCAACTTGATTCAAATAAGGCAACTTATCATTGCAATAAGAGTGCAGCTTTAATGGGCTTAGGCCGACTTCCTGAAGCATTAGTTGAATGCGAGGAAGCTATTCTCCTGGAATCCTCTTATACAAGAGCTCACCACCGTTTGGCAGCTATATATCTCAGATTGGGAGAAGCAGAAATGGCAATAAAATGGAATAATTCAACTCCACATGCAGATTCCGTACTCGCATTCCAAGCTCAGGCTCTTCAAAACCACCTTAACAAATGCCTTGAGGCTCGAAAAGTGAATGAGTGGAACGTTATACTAAAGGAAACACAATCTGCAATTTCACTATGTGCTGATTCAGCTCCGCAGTTCTATGCTCTACAAACAGAAGCCTTACTGAAGCTTCTGAAACATGAAGAGGCTTCTTCTACCCACGAAAAAATGCCCAAATTTGAACTTGATTGGTGTATTAAAATTTTTGGCTTGCCACGTACTGCATACTTGTTGATAGTAGGCGCTCAAGTTCACTTGGCAGCCGGCAGGTTCGATAATGCTGTCACAGCTGCTCAGCAAGCAGCTGAACTTGATCCAACCAATAAAGAGGTAAACGGAGTGGTAAGAAGGACGAGAGCAGTGAGATCAGCGAGAATGAGTGGCAATTTACTGTTCAAGGCTTCAAAGTTTATGGAAGCGTGTGGGGTTTACAATGAAGGGCTAGAGCATGATCCATTCAACTCTGTGTTGCTATGCAACAGAGCAGCATGCCGTTCTAAGCTGGCTCAATTTGAGAAAGCAATTGAAGATTGTAACTCAGCCCTTGCAATTCAGCCTTATTACAGTAAGGCAAGGTTACGGAGGGCAGATTGCAATGCCAAGTTGGAAAGATGGGGAGCTGCCATTCAAGACTACGAAATGTTAATGAGAGAAAAGCCAGGGGATGAGGAGGTGGCAAAGGCTTTATTTGAGGCCCAACTTCAACTCAAGATGCTGCGAGGAGAAGATATTAAGGACTTGAAATTTGGTTCCAATTTGGTTTCCATCTCAAGCAATGATCGCTTTAGACATTATGTTACCTTGCCTGGTATGTCCGTGGTTCTGTTTTGCAACAAGGCAACCCACAGGCAAGTATTGCTGGTGTTGGAGCAAACATGCAAGAGATTTCCATCTGTTAATTTCCTCAAGGTGGAGATTGAAGACCATCCCTACTTGGCAAAATCAGAAGGCGTGAGCTCTGTCCCAGCCTTCAGAATATACAAGAACGGATCAAGGGTCAAAGAGATTCCAGGAAACAGACACGAGTTGTTAGAACAATCAGTTAAACTATATACTAGCTGA 1989 0.4414 MASKVKTMVENDVGCGFVRRLSLLRSPLLRKSSVHSLSLKSADNVQSKDSIKDSKKTPNHESKGVRNIPTESNKPDLDQRTPRKSTSDHQNSQNRRLSDAARSSTSSSGNSLVLARISTTHQRDNENKATVNLKLTGNLLGNNSPKTSVSKKVESVPKNKELNSVTNFHNNAGMGNIMRKNSDELAQLRRQRIRIDPEVLKTEGNEAYKQGKFEDALSLYDRAIQLDSNKATYHCNKSAALMGLGRLPEALVECEEAILLESSYTRAHHRLAAIYLRLGEAEMAIKWNNSTPHADSVLAFQAQALQNHLNKCLEARKVNEWNVILKETQSAISLCADSAPQFYALQTEALLKLLKHEEASSTHEKMPKFELDWCIKIFGLPRTAYLLIVGAQVHLAAGRFDNAVTAAQQAAELDPTNKEVNGVVRRTRAVRSARMSGNLLFKASKFMEACGVYNEGLEHDPFNSVLLCNRAACRSKLAQFEKAIEDCNSALAIQPYYSKARLRRADCNAKLERWGAAIQDYEMLMREKPGDEEVAKALFEAQLQLKMLRGEDIKDLKFGSNLVSISSNDRFRHYVTLPGMSVVLFCNKATHRQVLLVLEQTCKRFPSVNFLKVEIEDHPYLAKSEGVSSVPAFRIYKNGSRVKEIPGNRHELLEQSVKLYTS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00381 662 SUPERFAMILY Thioredoxin-like 482 654 IPR036249 -
Accr3g00381 662 ProSiteProfiles TPR repeat profile. 384 417 IPR019734 GO:0005515
Accr3g00381 662 ProSiteProfiles TPR repeat profile. 197 230 IPR019734 GO:0005515
Accr3g00381 662 Gene3D Glutaredoxin 560 661 - -
Accr3g00381 662 Pfam Thioredoxin 598 656 IPR013766 -
Accr3g00381 662 MobiDBLite consensus disorder prediction 46 62 - -
Accr3g00381 662 SUPERFAMILY TPR-like 197 419 IPR011990 GO:0005515
Accr3g00381 662 SMART tpr_5 464 497 IPR019734 GO:0005515
Accr3g00381 662 SMART tpr_5 197 230 IPR019734 GO:0005515
Accr3g00381 662 SMART tpr_5 231 264 IPR019734 GO:0005515
Accr3g00381 662 SMART tpr_5 430 463 IPR019734 GO:0005515
Accr3g00381 662 SMART tpr_5 384 417 IPR019734 GO:0005515
Accr3g00381 662 SMART tpr_5 498 531 IPR019734 GO:0005515
Accr3g00381 662 MobiDBLite consensus disorder prediction 38 111 - -
Accr3g00381 662 Pfam Tetratricopeptide repeat 391 463 - -
Accr3g00381 662 CDD TRX_family 571 658 - -
Accr3g00381 662 Gene3D Tetratricopeptide repeat domain 195 549 IPR011990 GO:0005515
Accr3g00381 662 SUPERFAMILY TPR-like 435 546 IPR011990 GO:0005515
Accr3g00381 662 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 41 658 IPR044534 -
Accr3g00381 662 MobiDBLite consensus disorder prediction 136 152 - -
Accr3g00381 662 MobiDBLite consensus disorder prediction 136 157 - -
Accr3g00381 662 MobiDBLite consensus disorder prediction 86 111 - -
Accr3g00381 662 Pfam TPR repeat 204 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00381 Accr-Chr3 4222850 4225405 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00381 K09527 - gmx:100814381 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00381 3 4222850 4225405 Accr4g00452 4 4381765 4384592 CCT