Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02798 ATGGATTCGCATCGTCGCCGCCGCGCCCTTCCCGAAGGACCCACCGCTTCTTCTCTAAAACTCCTAAAGAAGCCTTCCTCCGCCGTCGCGAAAGGCAGCCATCGAACCGCGTCTCCGACTCTTAAAGCTTCCGATGCCCTACCTCTGCCGCTGTACCTTACCAATGCTGTTTTCTTCACGCTCTTCTTCGCCGTCGCGTACTATCTCCTCCACCGGTGGCGTGACAAGATCCGCAACTCTACGCCTCTTCACGTTGTTACCTTGTCTGAGCTTGCCGCCATTGTGTCCCTCATCGCGTCTTTTATTTACCTTCTCGGCTTCTTCGGCATTGACTTCGTACAGTCTTTCATCTCGCGTGCTTCTCACGATGTCTGGGACCTCGAGGACGACGCCGGCGAGGCGGATGCTGTTGCTGAGTCTCGCTCTAACAACCACCGCCCCCGCTGTGATTTCGTCATCGAGCAACCGGTTCCTATATTGAAGGTGGATCCCGATTCCTTGGTTTCCTCTCTTTCCTCTGAGGAAGATGAGAAGATCGTGCAGTCTGTGGTAGGTGGTACGATTCCATCGTACTCACTCGAGTCCAAGCTCGGGGACTGTACGCGGGCGGCGTCCATTCGACGTGAGGCCTTGCAGAGGATGTCTGGGAGATCTCTTCAGGGATTACCGTTGGATGGGTTCGATTACGATTCAATTTTGGGGCAGTGCTGCGAAATGCCGGTAGGTTACGTGCAAATTCCGGTGGGAATAGCTGGCCCGTTGTTGCTTGATGGATTTGAGTATACTGTACCAATGGCAACCACTGAGGGGTGCTTGGTGGCGAGCACGAACAGAGGCTGTAAAGCTATTTATGCCTCTGGCGGAGCTACCAGCGTAGTGCTGAGGGATGGGATGACCAGAGCCCCTGTTGTAAGGTTCGCCACGGCCAAAAGGGCTGCGGAGTTGAAGTTCTATATGGAGGATCCTCTCAATTTTGATACCTTGGCCGTCGTTTTCAATAGGTCAAGTAGATTTGCTAGGCTTCAAAGTATTCATTGTTCTATGGCTGGAAGGAACCTTTACATGAGATTCAGCTGTAGCACAGGTGATGCCATGGGGATGAACATGGTTTCCAAGGGCGTGCAGAATGTTCTTGATTTCCTTCAAAATGATTTCCCGGACATGGATGTTATTGGAATCTCTGGTAATTATTGTTCGGACAAGAAGCCTTCTGCTGTAAATTGGATTGAGGGGCGCGGAAAGTCAGTTGTTTGCGAAGCAATTATTAAAGAAGAGGTGATTAAGAAGGTGCTGAAGAGCAACGTGGCTGCCTTAGTGGAACTTAACATGCTTAAAAACCTTGCTGGTTCTGCTGTTGCCGGGGTTCTCGGTGGATATAATGCTCATGCCAGCAATATTGTCTCTGCCATTTTTATAGCTACTGGTCAAGATCCAGCGCAAAATATCGAGAGCTCTCATTGCATAACCATGATGGAAGCCGTCAATGATGGGAGAGACCTTCATATCTCAGTGTCCATGCCTTCCATTGAGGTGGGTACAGTTGGAGGTGGTACTCAGCTAGCATCTCAGTCTGCTTGCTTGAATTTATTGGGTGTGAAGGGCGCGAACAAGGAGTCACCAGGATCGAATGCTAGACTCTTGGCCGCCATTGTTGCTGGTTCAGTTTTGGCAGGAGAGCTATCTCTGATGTCTGCCATTGCTGCAGGTCAGCTTGTAAGGAGTCACATGAAGTACAATAGATCAAGCAAGGATGTCTGTAACATGGCAAATTGA 1773 0.5037 MDSHRRRRALPEGPTASSLKLLKKPSSAVAKGSHRTASPTLKASDALPLPLYLTNAVFFTLFFAVAYYLLHRWRDKIRNSTPLHVVTLSELAAIVSLIASFIYLLGFFGIDFVQSFISRASHDVWDLEDDAGEADAVAESRSNNHRPRCDFVIEQPVPILKVDPDSLVSSLSSEEDEKIVQSVVGGTIPSYSLESKLGDCTRAASIRREALQRMSGRSLQGLPLDGFDYDSILGQCCEMPVGYVQIPVGIAGPLLLDGFEYTVPMATTEGCLVASTNRGCKAIYASGGATSVVLRDGMTRAPVVRFATAKRAAELKFYMEDPLNFDTLAVVFNRSSRFARLQSIHCSMAGRNLYMRFSCSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNYCSDKKPSAVNWIEGRGKSVVCEAIIKEEVIKKVLKSNVAALVELNMLKNLAGSAVAGVLGGYNAHASNIVSAIFIATGQDPAQNIESSHCITMMEAVNDGRDLHISVSMPSIEVGTVGGGTQLASQSACLNLLGVKGANKESPGSNARLLAAIVAGSVLAGELSLMSAIAAGQLVRSHMKYNRSSKDVCNMAN 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02798 590 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 356 370 IPR023076 GO:0004420
Accr3g02798 590 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 297 413 IPR009023 -
Accr3g02798 590 CDD HMG-CoA_reductase_classI 177 580 IPR004554 GO:0004420|GO:0005515|GO:0008299
Accr3g02798 590 Pfam Hydroxymethylglutaryl-coenzyme A reductase 204 580 IPR002202 GO:0004420|GO:0015936
Accr3g02798 590 Gene3D - 247 575 IPR023074 GO:0004420
Accr3g02798 590 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 511 518 IPR023076 GO:0004420
Accr3g02798 590 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 172 569 IPR009029 GO:0015936|GO:0016616
Accr3g02798 590 Gene3D - 297 413 IPR009023 -
Accr3g02798 590 Gene3D - 165 246 IPR023282 GO:0004420
Accr3g02798 590 NCBIfam hydroxymethylglutaryl-CoA reductase (NADPH) 176 580 IPR004554 GO:0004420|GO:0005515|GO:0008299
Accr3g02798 590 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 24 584 IPR002202 GO:0004420|GO:0015936
Accr3g02798 590 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 402 575 - -
Accr3g02798 590 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 297 413 - -
Accr3g02798 590 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 565 578 IPR023076 GO:0004420
Accr3g02798 590 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 354 372 IPR002202 GO:0004420|GO:0015936
Accr3g02798 590 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 499 520 IPR002202 GO:0004420|GO:0015936
Accr3g02798 590 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 394 419 IPR002202 GO:0004420|GO:0015936
Accr3g02798 590 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 236 257 IPR002202 GO:0004420|GO:0015936
Accr3g02798 590 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 263 283 IPR002202 GO:0004420|GO:0015936
Accr3g02798 590 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 445 471 IPR002202 GO:0004420|GO:0015936
Accr3g02798 590 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 176 580 IPR002202 GO:0004420|GO:0015936
Accr3g02798 590 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 172 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02798 Accr-Chr3 58472334 58475388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02798 1 585 Lipid Metabolism Gene Families AT1G76490 74.030 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02798 K00021 - jre:109007712 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g02798 3 58472334 58475388 Accr9g00012 9 200441 202634 ECH
Accr3g02798 3 58472334 58475388 Accr3g02798 3 58472334 58475388 ECH