Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02598 ATGGCCCTCCAAAAGCATGTTCTTTCATTGTTCTTAATGTTGTTCATCATTGTTATTCCTTATGTCCCTTGTTATGTTACCTCTCAAGAGGACCCACTAAAGATACACGGTGGTGGTGATTCGCCTTTTAACAACATCGATGATGGTGGGACACCCAAGAAATTGATACAGCAAAGCACACAAGTATTGAGCTTAAATAGGTTTGTTAAGTTGGGTGTCACGTCTTCTTCAGCTTCCAAGCTTAATGTCAATGACTTTGGAGCTAAAGGGGATGGTAAAACTGATGACACAGAGGCTTTCAATAAGGCTTGGCAAGCTGCATGTTCTTCTGGAAGAGACGTAATTCTTGTGGTGCCTTCTAATTATGACTATCTTCTCAAGCCTGTCAGATTCTCAGGTCCCTGCAATTCTAGAATTACTTTCCAGATTTCTGGGACAATTGAAGCATCAGAGAACTCATCGGATTACACTGAAGACCCACAACACTGGCTTATGTTCGAGAGTGTTCAGAATGTAACAGTTCAAGGTGGTGGAACCATCAATGGAAATGGAGACACATGGTGGCGAAAATCCTGCAAAAAGAACCCAAGTCTTCCTTGCAAGAGCGCCCCCACGGCTGTGACTTTCTATAGGTGTGAGAATCTGATAGTGGAGAACTTGGTGATTAAGAATGCACAACAAATCCATGTGAACATCCAAGAATCCTCGAAAGTTAAGGTTTCTGGTGTTACAGTGAGTGCACCAGAGGATAGCCCCAACACTGATGGAATTCATATCACCAATACCAAAATTATCCAAATCTCAAACTCCGTTATAGCCACAGGAGATGATTGTTTGTCCATAGAGAGTGGAACCCAAAATTTACTAGCCTCAGACATAGCTTGCGGACCTGGCCATGGTATCAGTATCGGAAGCTTAGGGGAGACCGGAACAGAAGAGCTTGTGTCAGGAATAACAGTGAATGGAGCTCATCTCTCTGGAACTACAAATGGAGTTAGAATAAAGACTTGGCCTGGAGGGTCAGGAAGTGCAAGCAATATCAAGTTTCAAAATATTGTCATGGAAAATGTGACTAACCCCATAATAATAGATCAGAACTACTGTGACCAGAAGACTCCATGCAAACAACAGAAGTCAACGGTGAAGATCAGGAATGTGTTGTACGAGAACATAAAGGGGACGAGTGCTTCAGATGTTGCCGTGAGCTTGAACTGCAGCCAAAGCTTTCCATGTCAGGGAATTGTGTTGCACAACATAGACCTCCGGCAGGAACAAGAAGCACAAATTCCTAAAGCTTTATGTCAAAGTGCTCTCTTGTCCTACGTTGGATCCGTTTCCCCTCGTTGCCCATAG 1353 0.4339 MALQKHVLSLFLMLFIIVIPYVPCYVTSQEDPLKIHGGGDSPFNNIDDGGTPKKLIQQSTQVLSLNRFVKLGVTSSSASKLNVNDFGAKGDGKTDDTEAFNKAWQAACSSGRDVILVVPSNYDYLLKPVRFSGPCNSRITFQISGTIEASENSSDYTEDPQHWLMFESVQNVTVQGGGTINGNGDTWWRKSCKKNPSLPCKSAPTAVTFYRCENLIVENLVIKNAQQIHVNIQESSKVKVSGVTVSAPEDSPNTDGIHITNTKIIQISNSVIATGDDCLSIESGTQNLLASDIACGPGHGISIGSLGETGTEELVSGITVNGAHLSGTTNGVRIKTWPGGSGSASNIKFQNIVMENVTNPIIIDQNYCDQKTPCKQQKSTVKIRNVLYENIKGTSASDVAVSLNCSQSFPCQGIVLHNIDLRQEQEAQIPKALCQSALLSYVGSVSPRCP 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02598 450 PANTHER - 81 434 - -
Accr2g02598 450 SUPERFAMILY Pectin lyase-like 79 449 IPR011050 -
Accr2g02598 450 FunFam Polygalacturonase QRT2 67 450 - -
Accr2g02598 450 Gene3D - 70 444 IPR012334 -
Accr2g02598 450 ProSitePatterns Polygalacturonase active site. 292 305 IPR000743 GO:0004650|GO:0005975
Accr2g02598 450 SMART pbh1 262 283 IPR006626 -
Accr2g02598 450 SMART pbh1 344 365 IPR006626 -
Accr2g02598 450 SMART pbh1 315 336 IPR006626 -
Accr2g02598 450 SMART pbh1 235 261 IPR006626 -
Accr2g02598 450 Pfam Glycosyl hydrolases family 28 108 428 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02598 Accr-Chr2 61574957 61577342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02598 45 449 Glycoside Hydrolase AT3G57510 55.340 2.99e-155 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02598 K01184 - gmx:100816917 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01952 5 45831462 45833843 Accr2g02598 2 61574957 61577342 CCT
Accr2g02598 2 61574957 61577342 Accr2g02598 2 61574957 61577342 ECH