Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02237 ATGGCTCTCCTTCTCTTCATTACTGTAATCTTTATGATCCCTTCAAGCAGTGCCTACGGGCCACCTTCACCTGGCTACTGGCCAAGCTCCAAGTTCAGGTCTATGAACTTTTACAAAGGATTTAGAAACCTCTGGGGTCCTCAGCACCAAACACTACACAAAAATGAATTAAGAATATGGCTTGATAAAACCTCAGGTAGTGGCTTCAAGTCTGTTCGCCCATTCCGGTCTGGTTACTTCGGTGCTTCCATGAAGCTCCAACCTGGATATACTGCAGGCGTTATATCATCCCTCTATCTTTCAAACAATGAAGCACATCCAGGCTTCCATGATGAGGTGGACATTGAATTTCTGGGGACAACATTTGGGAAGCCTTACACTTTGCAGACCAATGTGTATATAAGAGGAAGTGGTGATCAGAAAATTATAGGCAGAGAGATGAAATTCCATCTCTGGTTTGATCCTACCCAAGATTTTCATCGCTATGCTCTGCTGTGGAGTCCTAAGGAAATAATATTCTTTGTGGATGATGTGCCCATAAGGAGATACCCGAGGAAGAGTGCGGCAACTTTTCCAGTGAGGCCAATGTGGCTTTATGGCTCAATATGGGACGCTTCATCATGGGCAACAGAAGATGGCAAGTACAAAGCTGATTACAGATATCAGCCTTTTGTTGCAAGGTACGCCAACTTTAAGGCTAGTGGTTGCTCCGCCTATACCCCAGCCAGGTGCCACCCTGTCTCCGCCTCGCCGTACCGCTCCGGTGGCCTTACACGACAACAATATGCGGCCATGCGATGGGTACAGAGATACCACATGGTTTACAATTATTGCAGGGACCCCAAAAGAGACCACAGACTAACCCCAGAATGCTTGCATTCCCACTGA 888 0.4673 MALLLFITVIFMIPSSSAYGPPSPGYWPSSKFRSMNFYKGFRNLWGPQHQTLHKNELRIWLDKTSGSGFKSVRPFRSGYFGASMKLQPGYTAGVISSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDQKIIGREMKFHLWFDPTQDFHRYALLWSPKEIIFFVDDVPIRRYPRKSAATFPVRPMWLYGSIWDASSWATEDGKYKADYRYQPFVARYANFKASGCSAYTPARCHPVSASPYRSGGLTRQQYAAMRWVQRYHMVYNYCRDPKRDHRLTPECLHSH 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02237 295 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 253 291 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Accr2g02237 295 FunFam Xyloglucan endotransglucosylase/hydrolase 24 293 - -
Accr2g02237 295 SUPERFAMILY Concanavalin A-like lectins/glucanases 59 279 IPR013320 -
Accr2g02237 295 PIRSF EndGlu_transf 2 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
Accr2g02237 295 Gene3D - 17 291 - -
Accr2g02237 295 Pfam Glycosyl hydrolases family 16 39 220 IPR000757 GO:0004553|GO:0005975
Accr2g02237 295 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 16 228 IPR000757 GO:0004553|GO:0005975
Accr2g02237 295 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 34 291 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02237 Accr-Chr2 57234612 57236143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02237 1 291 Glycoside Hydrolase AT3G44990 65.870 3.84e-143 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02237 K08235 - gmx:100796698 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02237 2 57234612 57236143 Accr5g02253 5 48849953 48851125 CCT
Accr2g02237 2 57234612 57236143 Accr2g02237 2 57234612 57236143 ECH