Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02104 ATGGTGGGTATCTTCTCCTTACTAACTGGGATACCTGGTCCCAGTGGTTTTGGATCTGCTTCCACTGCTCAACAGGTTACTGAAGGAATTGATGCCACCGATCTCACTGCCATTGTCACCGGAGGAGCAAGTGGTATAGGGTTGGAGACAGCAAGAGTCTTGGCTCTTCGAAATGCCCACGTCATCATTGCTGCGAGGAACTTGGAGGCTGCAAAGGAAGCTAAACAGCTTATTCTGCAAGAAAATGAGTATGCTCGAGTGGACATTCTCAAGCTAGACCTCTGCTCAGTCAAATCTATCAGATCATTTGTTGACAATTTCTTGACTCTTGATCTTCCCCTCAACATCTTAATAAACAATGCTGGTGTCATGTTCTGTCCCTTCCAACTCTCTGAGGATGGGGTCGAAATGCAATTTGCTACTAATCATCTTGGTCATTTCCTGTTGACAAACCTCCTTCTTGACAAAATGAAGCAAACTGCAAAAGCAAGTGGAATCGAGGGCAGGATTGTCAATTTGTCATCAATTGCCCATACCTACACCTATGAAGAGGGTATTCGCTTTGATAAGATCAATGATCAAACTGGTTACTCTGACAAAAAAGCATATGGGCAGTCCAAGTTGGCCAATATATTGCACGCAAATGAGCTTTCTCGTCGCCTGCAGGAAGAGGGTGTGAACATTACGGCCAACTCAGTCCACCCAGGAGTTATAATGACCCCTCTCATGAGACATTCTGCCTTCCTTATGCGTTTTCTCAAGTTATTCACCTTTTACATATGGAAGAATGTCCCACAGGGAGCAGCCACAACATGTTACGTTGCTCTGCACCCAAGGGTGAAGGGTGTGAGTGGGAAGTACTTTCTGGATTGCAATGAGTTTGAACCAGGTGCTTTGGCTACTGACGAACTGTTAGGGAGGAAACTCTGGGATTTTAGCCACAAGTTGATCAACTCTATTTCTAAAGACTGA 972 0.4496 MVGIFSLLTGIPGPSGFGSASTAQQVTEGIDATDLTAIVTGGASGIGLETARVLALRNAHVIIAARNLEAAKEAKQLILQENEYARVDILKLDLCSVKSIRSFVDNFLTLDLPLNILINNAGVMFCPFQLSEDGVEMQFATNHLGHFLLTNLLLDKMKQTAKASGIEGRIVNLSSIAHTYTYEEGIRFDKINDQTGYSDKKAYGQSKLANILHANELSRRLQEEGVNITANSVHPGVIMTPLMRHSAFLMRFLKLFTFYIWKNVPQGAATTCYVALHPRVKGVSGKYFLDCNEFEPGALATDELLGRKLWDFSHKLINSISKD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02104 323 Pfam short chain dehydrogenase 36 183 IPR002347 -
Accr2g02104 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 294 IPR036291 -
Accr2g02104 323 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Accr2g02104 323 PRINTS Glucose/ribitol dehydrogenase family signature 226 243 IPR002347 -
Accr2g02104 323 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
Accr2g02104 323 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Accr2g02104 323 PANTHER RETINOL DEHYDROGENASE 14 317 - -
Accr2g02104 323 CDD retinol-DH_like_SDR_c_like 36 310 - -
Accr2g02104 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Accr2g02104 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 IPR002347 -
Accr2g02104 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 IPR002347 -
Accr2g02104 323 Gene3D - 25 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02104 Accr-Chr2 56062827 56066302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02104 24 297 Acyl Lipid Metabolism Gene Families AT3G55310 25.939 3.21e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02104 - K11153 gmx:100807056 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02104 2 56062827 56066302 Accr5g02378 5 49903376 49904987 CCT
Accr2g02104 2 56062827 56066302 Accr2g02104 2 56062827 56066302 ECH