Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01838 ATGGCGCGGCCAAGGATGCCGGGACGCGGCATTGTTTTCTATGTTCTGGTTTTCGTGTGTTTAGCACAGATACAGTGTCGTTTCCATGTGCTTGCCATGTTGGACCCTCTTGATTTCTTGGCTCTGCAATCGATTCGCAAGTCTCTCGAGGATATGCCCGGCTCGAATTTCTTTGCCTCTTGGGATTTCACTGCTGACCCCTGTCATTTTGACGGAGTTTACTGTGATACCGACAGGGTTGTTGCCCTTAATCTCGGCGACCCCAGAGCTGGTTCTCCCGGTCTCACCGGTAGGCTCGACCCGGCGATCGGCAAGCTCTCTGCTCTTTCCGAGTTCACGGTTGTGCCTGGCAGAATCTACGGTTCGCTGCCTCAGTCTTTCTCTAATTTGAAGAACATCCGATTCCTTGGCGTTAGCCGGAACTTCATCTCCGGCGAGATTCCAGAGCACTTGGGGAGGTTGCGCACTCTCAGAACCCTCGATCTCAGCTACAATCAGCTCACCGGACGCATTCCTTCATCCATCGGAGCCTCGCCGGAGCTAAGCAACTTGATCCTCTGCCACAACCACCTCTCCGGTTCAGTCCCCTCGTTTGCGTCGCACACGCTTACTCGACTTGACCTGAAGCACAACTCTCTAACGGGCACGCTCGCTCCCAATTCTCTCCCTCCCTCTCTCCAATATCTCTCCCTGTCCTGGAATAATCTCAGTGGCCCAGTGGACCGGCTCTTGAACCGGATGAACCAGTTGAACTACTTGGACCTTAGCTTGAACCGGTTCACGGGCATCATTCCACCACGCATATTCTCACTCCCACTCACCAATCTTCAACTGGAAAGGAACCAATTCACCGGCGCTGTCCAACCGGGTAATCAGGTCACAATCCCAACGGTCGATCTCAGCCACAACGAGTTTTCGGGTCAAATATCACCCATGTTTTCGACCGTGGAGAATCTATACCTCAACAACAACCGATTCTCAGGTCGGGTTCCGAGCAACTTCGTGGATCGTCTACTGGCGGCCAGAATACAGATACTGTATTTGCAGCACAACTATCTGACCGACATTGAGATCACTCCAACGGCTAAGATTCCTGTGAGCAGCTCGTTGTGTCTTCAATACAACTGTATGGTCCCGCCCATACAGACGCCATGCCCCTTGAGGTCTGGTAAACAGATAACGAGGCCTACTGCACAATGCAACCAATGGAGAGGGTAA 1218 0.5263 MARPRMPGRGIVFYVLVFVCLAQIQCRFHVLAMLDPLDFLALQSIRKSLEDMPGSNFFASWDFTADPCHFDGVYCDTDRVVALNLGDPRAGSPGLTGRLDPAIGKLSALSEFTVVPGRIYGSLPQSFSNLKNIRFLGVSRNFISGEIPEHLGRLRTLRTLDLSYNQLTGRIPSSIGASPELSNLILCHNHLSGSVPSFASHTLTRLDLKHNSLTGTLAPNSLPPSLQYLSLSWNNLSGPVDRLLNRMNQLNYLDLSLNRFTGIIPPRIFSLPLTNLQLERNQFTGAVQPGNQVTIPTVDLSHNEFSGQISPMFSTVENLYLNNNRFSGRVPSNFVDRLLAARIQILYLQHNYLTDIEITPTAKIPVSSSLCLQYNCMVPPIQTPCPLRSGKQITRPTAQCNQWRG 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01838 405 Gene3D Ribonuclease Inhibitor 38 200 IPR032675 -
Accr2g01838 405 Pfam Leucine Rich repeat 155 169 IPR001611 GO:0005515
Accr2g01838 405 Pfam Leucine Rich repeat 224 238 IPR001611 GO:0005515
Accr2g01838 405 Pfam Leucine Rich repeat 200 215 IPR001611 GO:0005515
Accr2g01838 405 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 16 405 - -
Accr2g01838 405 Gene3D Ribonuclease Inhibitor 201 383 IPR032675 -
Accr2g01838 405 FunFam Nuclear pore complex protein NUP107 37 197 - -
Accr2g01838 405 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Accr2g01838 405 SUPERFAMILY L domain-like 33 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01838 Accr-Chr2 52431045 52432262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01838 41 354 Receptor kinase-like Gene Family AT5G62230 32.515 5.47e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01838 - - qsa:O6P43_010682 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01838 2 52431045 52432262 Accr5g02574 5 52074798 52076024 CCT
Accr2g01838 2 52431045 52432262 Accr2g01838 2 52431045 52432262 ECH