Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03525 ATGGCAACAAATTCTTCTAATGGAGAGCACCGAACGACAACGACGACAACACAGGCAACAAAGCCACCTCCCTTGCCTTCTCCCTTGCGCTTTTCCAAGTTCTTTCAGCCCAACATGAGAATTCTGGTTACTGGTGGAGCTGGATTCATTGGCTCTCACTTAGTTGACAGATTAATGCAGAATGAGAAAAATGAGGTTGTTGTTGCTGACAACTTCTTCACGGGATCCAAGGATAACCTTAGAAAATGGATCGGTCACCCTAGATTTGAGTTGATTCGTCATGATGTGACAGAGCAATTGTTCATTGAGGTTGATCAGATCTACCATCTTGCTTGTCCTGCTTCTCCGATTTTCTACAAATATAATCCCGTGAAGACTATAAAGACAAATGTGATCGGAACACTGAACATGCTTGGGCTGGCAAAAAGAGTGGGAGCAAGGATTTTGTTGACATCTACTTCAGAAGTATATGGGGATCCTCTTGTGCATCCACAACCAGAAAGTTATTGGGGCAATGTGAACCCCATTGGAGTTCGAAGTTGCTATGATGAGGGAAAGCGTGTGGCAGAAACATTGATGTTTGACTATCATAGGCAGCATGGAATAGAAATACGCATTGCCAGAATCTTCAACACATATGGACCACGCATGAATATTGATGATGGGCGAGTTGTGAGCAACTTTATTGCTCAAGCACTTCGTGGGGAGCCCCTAACTGTACAAGTTCCTGGCACGCAAACTCGTAGCTTCTGCTATGTCTCTGATATGGTTGATGGCCTTATCCGTCTAATGGAAGGAGAAAACACCGGTCCAATCAACCTTGGGAATCCAGGTGAATTTACAATGATTGAACTTGCTGAGACAGTGAAGGAGCTTATCAATCCAAGTGTGGAGATAAAGATGGTGGAAAACACTCCTGATGATCCTCGACAGAGAAAACCAGACATAACCAAGGCGAAGGAATTGTTAGGGTGGGAGCCAAAGATCAAACTGAGAGATGGTCTTCCTCTAATGGAAGAGGATTTCCGTCTCAGGCTTGGAGTTGCCAAAAAGAATTAA 1059 0.441 MATNSSNGEHRTTTTTTQATKPPPLPSPLRFSKFFQPNMRILVTGGAGFIGSHLVDRLMQNEKNEVVVADNFFTGSKDNLRKWIGHPRFELIRHDVTEQLFIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQVPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMIELAETVKELINPSVEIKMVENTPDDPRQRKPDITKAKELLGWEPKIKLRDGLPLMEEDFRLRLGVAKKN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03525 352 CDD UGD_SDR_e 39 343 - -
Accr1g03525 352 MobiDBLite consensus disorder prediction 1 20 - -
Accr1g03525 352 FunFam UDP-glucuronic acid decarboxylase 6 38 347 - -
Accr1g03525 352 Pfam GDP-mannose 4,6 dehydratase 42 336 IPR016040 -
Accr1g03525 352 MobiDBLite consensus disorder prediction 1 27 - -
Accr1g03525 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 34 343 IPR036291 -
Accr1g03525 352 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 23 347 IPR044516 GO:0042732|GO:0048040|GO:0070403
Accr1g03525 352 Gene3D - 38 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03525 Accr-Chr1 71708978 71711878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03525 39 351 Miscellaneous Gene Families AT1G02000 24.425 3.66e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03525 K08678 - qsu:112026144 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03525 1 71708978 71711878 Accr13g00182 13 1628320 1632143 CCT
Accr1g03525 1 71708978 71711878 Accr1g03525 1 71708978 71711878 ECH