Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00182 ATGGCAGCCAACTCTTCCAATGGGGATCACCAAACACCGACGAAGTCGCCGCCTTTGCCATCTCCACTGCGTTTTTCCAAGTTCTTTCAGTCAAATATGAGAATTTTGGTTACTGGAGGAGCTGGATTTATTGGCTCTCACCTGGTGGACAGATTGATGGAAAATGAAAAAAATGAGGTAATAGTTGTTGATAACTACTTCACTGGATCCAAAGACAATCTGAAAAAATGGATTGGCCATCCAAGATTCGAGCTCAAGCGTCATGATGTCACAGAGCCTTTGTTGGTTGAAGTTGATCAGATTTACCATCTTGCATGTCCCGCTTCTCCTATCTTCTACAAATACAATCCTGTGAAGACAATAAAGACAAATGTGATTGGTACGCTGAACATGCTAGGGCTTGCAAAACGACTTGGTGCAAGGATTTTGCTTACATCAACATCAGAAGTCTATGGAGACCCTCTTGTGCACCCACAGCCTGAAACCTATTGGGGCAATGTCAATCCCATAGGGGTTCGGAGCTGCTATGATGAGGGAAAGCGTGTGGCTGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGTGTTGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGATGGGCGTGTTGTTAGCAACTTCATTGCACAGGCACTTCGGGGTGAACCATTGACGGTCCAATCTCCAGGAACGCAAACTCGCAGTTTCTGTTATGTCTCTGACCTGGTCGACGGCCTTATCCGTCTCATGGAAGGGGAACACACTGGTCCAATCAATCTTGGAAACCCAGGTGAATTTACAATGACTGAACTCGCAGAGACGGTGAAAGAGCTTATCAATCCAAAGGTGGAAGTAAAGATGGTAGAGAATACTCCCGATGACCCTCGACAGAGAAAACCTGATATAACGAAGGCAAAGGAATTGCTTGGTTGGGAACCCAAGGTCAAGTTGCGGGATGGCCTTCCCCTTATGGAAGAGGATTTCCGTCTCAGGCTTGGAGTTGATAAGAACTAA 1038 0.4499 MAANSSNGDHQTPTKSPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVVDNYFTGSKDNLKKWIGHPRFELKRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRLGARILLTSTSEVYGDPLVHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMEGEHTGPINLGNPGEFTMTELAETVKELINPKVEVKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEEDFRLRLGVDKN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00182 345 MobiDBLite consensus disorder prediction 1 21 - -
Accr13g00182 345 CDD UGD_SDR_e 33 337 - -
Accr13g00182 345 FunFam UDP-glucuronic acid decarboxylase 6 32 341 - -
Accr13g00182 345 Coils Coil 345 345 - -
Accr13g00182 345 Pfam GDP-mannose 4,6 dehydratase 36 330 IPR016040 -
Accr13g00182 345 Gene3D - 32 339 - -
Accr13g00182 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 337 IPR036291 -
Accr13g00182 345 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 20 341 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00182 Accr-Chr13 1628320 1632143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00182 30 329 Miscellaneous Gene Families AT1G02000 24.699 2.46e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00182 K08678 - pvy:116126669 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03525 1 71708978 71711878 Accr13g00182 13 1628320 1632143 CCT