Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03346 ATGACCGAGGTCCTCCACTCTTCATCCCATTTCTCTTCCTCTTCGTCTTCCCTCTCGCGTAGGCCCCTATCTCCACCGTCTTGCGCAACCCCTCCCGGCGATGGCATTTTCACTATTGGTGATCAAGAACCTCCCTCGCCGTCTTCGCTAGCCGTGGAGGGCTCTTCGACGGCGGCGGACTGTGACACCGAGGAGCGGGACAAGCGCCGGACGGAACAGCTTTCTGTTTTGGCGCTTGGTGCGGCCCTTTTCAGGAAATCGTTGCTTTCTTGTAAGAGTGGTGGGAGGGAGGTTTGCCCGATGGAGATCGGACGGCCTTCCAATGTGCGCCATGTTGCACATGTCACGTTTGATAGGTTCAACGGTTTCTTGGGTTTGCCTGACGAGTTCGAACCTGAAGTGACCAGAAGGCCCCCTAGTGCTAGTGCGACTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTATCATATGACTCAAGAGGGAACATTGTGCCAACGATTCTGTTACGAATACAAAAACGCTTATATACTCAAGGAGGGTTGCAGGCAGAAGGGATTTTCAGAATCAATGCAGAAAATAGTCAAGAGGAAAATGTAAGGGACCAATTAAATAGTGGAGTGGTCCCACAGGGTGTTGATGTGCATTGTTTGGCGGGGCTTATCAAGGCTTGGTTTCGGGAACTGCCTAGGGGTGTTCTGGATTCTTTATCCCCCGAGCAGGTAATGCAATGCCAGACAGAGAAGGAATGTGCTGAACTAGTAAGGCATCTACCTTCCACTGAAGCTGCCCTCTTGGATTGGGCCATCAATCTGATGGCTGATGTTGTACTACAGGAACATCTGAACAAGATGAATGCACGCAACATTGCCATGGTTTTTGCACCAAACATGACTCAGATGGCAGATCCTTTAACTGCATTGATGTTCGCAGTTCAAGTGATGAATTTCCTAAAGACGCTTGTACTGAAGACCCTCCAAGAAAGAAAGAATTTGTTAAGAGACTCTCCTCTTCAATCTCATTACGAGCCTTCGGATGAGAATGGACACCATAGCCCTTTGCAATCCTGCCAGCGATATGCTAGTGGAGAAAGTGAAGATGCACAGGAAAACTTCATTTCTGATAAATCTATCCAAGAATGTTCCCCTTACTCTCCTCACCAAAGCATTAACCTAACTGGAGAAGCTGGCAGTTTGTTAACCTCTCCTGAGCATCTAGATTATGATGGAGGTTTATGTTGTAAGTTTTCGCCCAAAGGAAACGCCAGGAAGAGCAAGACTGGCCGACCAAGTAGTCCAAATACTAGAAGGAAGAGTAGAAAAGAGAAGAGGGGGATTAGCAATCTGAGTCGGTTGGTTTCAAGATCAGAGAGGATAGAAAGCTGGAGGTGA 1389 0.4802 MTEVLHSSSHFSSSSSSLSRRPLSPPSCATPPGDGIFTIGDQEPPSPSSLAVEGSSTAADCDTEERDKRRTEQLSVLALGAALFRKSLLSCKSGGREVCPMEIGRPSNVRHVAHVTFDRFNGFLGLPDEFEPEVTRRPPSASATVFGVSTESMQLSYDSRGNIVPTILLRIQKRLYTQGGLQAEGIFRINAENSQEENVRDQLNSGVVPQGVDVHCLAGLIKAWFRELPRGVLDSLSPEQVMQCQTEKECAELVRHLPSTEAALLDWAINLMADVVLQEHLNKMNARNIAMVFAPNMTQMADPLTALMFAVQVMNFLKTLVLKTLQERKNLLRDSPLQSHYEPSDENGHHSPLQSCQRYASGESEDAQENFISDKSIQECSPYSPHQSINLTGEAGSLLTSPEHLDYDGGLCCKFSPKGNARKSKTGRPSSPNTRRKSRKEKRGISNLSRLVSRSERIESWR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03346 462 SMART RhoGAP_3 162 322 IPR000198 GO:0007165
Accr1g03346 462 FunFam Rho GTPase-activating protein 5 133 326 - -
Accr1g03346 462 CDD CRIB 101 134 - -
Accr1g03346 462 CDD RhoGAP 165 320 - -
Accr1g03346 462 MobiDBLite consensus disorder prediction 42 56 - -
Accr1g03346 462 Pfam RhoGAP domain 165 299 IPR000198 GO:0007165
Accr1g03346 462 SUPERFAMILY GTPase activation domain, GAP 143 321 IPR008936 -
Accr1g03346 462 ProSiteProfiles Rho GTPase-activating proteins domain profile. 148 332 IPR000198 GO:0007165
Accr1g03346 462 MobiDBLite consensus disorder prediction 1 24 - -
Accr1g03346 462 MobiDBLite consensus disorder prediction 429 443 - -
Accr1g03346 462 MobiDBLite consensus disorder prediction 1 70 - -
Accr1g03346 462 ProSiteProfiles CRIB domain profile. 103 116 IPR000095 -
Accr1g03346 462 SMART PBD_5 103 137 IPR000095 -
Accr1g03346 462 MobiDBLite consensus disorder prediction 416 449 - -
Accr1g03346 462 Gene3D CRIB domain 100 132 IPR036936 -
Accr1g03346 462 Pfam P21-Rho-binding domain 102 129 IPR000095 -
Accr1g03346 462 PANTHER MKIAA1688 PROTEIN 1 378 IPR044785 GO:0005096
Accr1g03346 462 Gene3D Rho GTPase activation protein 133 332 IPR008936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03346 Accr-Chr1 69894955 69898184 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03346 - K20642 gmx:100775644 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03346 1 69894955 69898184 Accr13g00462 13 4703091 4706909 CCT