Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03293 ATGGTTTGTCGCATCTATGGCGTCGCCAAGCTCCGCACCTTCCTTCTTCTTCTTCTTCTTCTTCTTGGTTTCCCGCTTGCATTGTCGGAAATGCCAAATCCCAGGTCGTCGATCTCTTCTTCTGTGAGCTCTGGTCAGATAAACTCCAACTCGGTTCTGGTGGCTCTTCTGGATTCACATTACACGGAAATCGCTGAGCTTGTGGAGAAGGCTATGCTCTTGCAGACTCTGGAGGATACTGTCGGCAGCCACAATATCACCATCTTCGCGCCCAGAAATGAGGCTCTCGAACGCGATCTCGACCCGGAATTCAAGCGCTTCCTTCTCGAACCCGGCAATCTCAAGTCTCTCCAGACCTTACTCATGTTCCATATCATTCCGACCAGAATCGGATCGGAGCAGCTTCTGACTCGAACCGGGTTGACCCGTCACGATACGCTTTCCAATGACCATCTGCATCTTGAGAACAATGGGACTACGGAATGGACGGTGGATCGCGCCAAGATTATCCAACCTGACGCCGTGACCCGACCCGATGGCGTCATCCACGGGATTGAGCGCCTCTTGGTGCCCCGTTCCGTGCAAGACGACTTCAACCGCCGGCGAAGCCTGCAGTCTATCACGGCGGTGAAGCCAGAGGGAGCACCGGAAGTGGACCCGAGAACTCATCGGCTCAAGAAACCCGCCCCACCTGCGAAACCCGGATCTCCTCCTGCTTTGCCAATGTTCGATGCAATGGCTCCTGGACCCGCACTAGCTCCTGCTCCAGCGCCCGGACCAGGCGGAGCCCGCCACCACTTCAACGGTGAAGCCCAGGTTAAGGATTTTATTCAGACACTGCTCCATTACGGCGGGTACAATGAAATGGCAGATATACTGGTGAATCTAACATCCCTAGCCACCGAAATGGGTCGACTAGTCTCCGAGGGGTACGTGCTCACCGTTTTGGCTCCCAATGACGAGGCCATGGCTAAATTGACTACCGACCAATTGAGTGAACCAGGCGCACCGGAACAGATTATCTATTACCATCTCATACCGGAGTATCAAACCGAAGAGAGTATGTACAATGCAGTTCGACGGTTCGGTAAGGTCCGGTATGATACTCTACGGTTGCCGCATAAGGTGGTGGCTCAGGAGGCAGATGGATCAGTGAAATTCGGGCAGGGAGACGGGTCGGCGTATTTGTTCGACCCGGATATCTATACGGATGGGCGGATCTCGGTTCAGGGCATCGACAACGTATTGTTCCCACTGGAGGAGGAGACGAAGCCCATTAACAGAACGGTTCAACCCACTAAGGTCGTGGTCAAGCACAGAAGAGGAAAATTGCTGGAGGCAGCGTGTTGGGCGCTTGGAACCATTGGGCAACATGGTAGATTCACCACTTGCCACTAA 1398 0.5393 MVCRIYGVAKLRTFLLLLLLLLGFPLALSEMPNPRSSISSSVSSGQINSNSVLVALLDSHYTEIAELVEKAMLLQTLEDTVGSHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPTRIGSEQLLTRTGLTRHDTLSNDHLHLENNGTTEWTVDRAKIIQPDAVTRPDGVIHGIERLLVPRSVQDDFNRRRSLQSITAVKPEGAPEVDPRTHRLKKPAPPAKPGSPPALPMFDAMAPGPALAPAPAPGPGGARHHFNGEAQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDNVLFPLEEETKPINRTVQPTKVVVKHRRGKLLEAACWALGTIGQHGRFTTCH 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03293 465 FunFam Fasciclin-like arabinogalactan protein 16 268 419 - -
Accr1g03293 465 MobiDBLite consensus disorder prediction 230 244 - -
Accr1g03293 465 SMART fasc_3 314 419 IPR000782 -
Accr1g03293 465 SMART fasc_3 87 192 IPR000782 -
Accr1g03293 465 ProSiteProfiles FAS1/BIgH3 domain profile. 273 401 IPR000782 -
Accr1g03293 465 SUPERFAMILY FAS1 domain 252 419 IPR036378 -
Accr1g03293 465 Pfam Fasciclin domain 60 191 IPR000782 -
Accr1g03293 465 Pfam Fasciclin domain 298 418 IPR000782 -
Accr1g03293 465 Gene3D FAS1 domain 52 192 IPR036378 -
Accr1g03293 465 MobiDBLite consensus disorder prediction 210 266 - -
Accr1g03293 465 SUPERFAMILY FAS1 domain 53 192 IPR036378 -
Accr1g03293 465 Gene3D FAS1 domain 292 418 IPR036378 -
Accr1g03293 465 ProSiteProfiles FAS1/BIgH3 domain profile. 48 189 IPR000782 -
Accr1g03293 465 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 6 462 IPR044654 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03293 Accr-Chr1 69515221 69517546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03293 - - qsa:O6P43_000545 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03293 1 69515221 69517546 Accr13g00529 13 5556553 5559221 CCT