Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00529 ATGGATCGTCGCATCCATGGCGCCACCACGCTTCGCATCTCTCTTCTCCTTCTTCTCTCCGCCTTCCCCTTTCTCGCATTCTCCGATTCTCCAAATCCCAGATTGTCGGTGGCTTCTTCTTCCTCGGGTCAGATAAACTCCAACTCAGTTCTGGTGGCTCTTCTGGACTCGCATTACACGGAACTCGCTGAGCTGGTCGAGAAGGCTATGCTTCTCCAGACTCTCGAAGACACTGTCGGCGCCCACAACATCACCATCTTCGCTCCCAGAAACGAAGCTCTCGAGCGCGATCTCGACCCTGAGTTCAAGCGCTTCCTTCTTGAACCCGGTAATCTCAAGTCTCTTCAGTCCTTGCTCATGTTTCATATCATTCCCACTCGAATGGGATCGCAGGCGTTGCCCACTCAAACCGGGTCAGCCCGTCACCAGACGCTCTTTAAGTCCGAGTTCATTCACCTTGCCAATAATGGGACCGGGGAATGGACAGTGGATCGCGCCAAGATTATTCACCCTGATGTTGTCTCCCGACCCGACGGAGTGATCCACGGGATTGAGCGCCTCCTGGTCCCTCGTTCCGTCCAAGATGACTTCAACCGCCGGCGTAGTCTTCAGTCCATTACGGCGGTGAAGCCCGAGGGAGCACCGGAGGTTGACCCGAGGACGCATCGGCTGAAGAAGCCGGCTCCGCCTGTTAAACCAGGTTCGCCACCGGTTTTGCCCATTTACGATGCCATGGCTCCGGGACCCTCTCTGGCGCCCGCTCCAGCTCCCGGTCCCGGTGGACCACACCACCATTTCAACGGCGAAGCACAGGTCAAGGATTTCATTCAGACACTGCTTCATTACGGTGGGTACAATGAAATGGCCGACATTTTGGTGAATCTGACTTCCTTAGCTACCGAAATGGGTCGGTTGGTGTCTGAGGGCTATGTCCTAACTGTTTTAGCTCCGAACGATGAAGCCATGGCTAAACTAACCACGGACCAGCTGAGCGAACCGGGTGCTCCGGAGCAGATAATGTACTACCATCTAATACCCGAATATCAAACCGAAGAGAGTATGTATAATTCAGTTCGAAGGTTCGGAAAAGTCCGGTATGATACTCTCCGGTTGCCGCATAAGGTGGTCGCTCAGGAGGCAGACGGGTCGGTCAAATTCGGGCAAGGAGACGGGTCGGCTTATTTGTTCGACCCCGATATATACACGGACGGTCGTATCTCGGTTCAGGGTATCGATGGGGTTTTGTTCCCACCAGAGGAGGAGGAAAAGCCGGTGACCCGGACGGTTCAACCCGCCAAAGTCGTGGTCAAGCATAGAAGAGGAAAATTGCTGGAAGCTGCTTGCTGGATGCTTGGAACCCTTGGACAGGATTCTAGATTCACCACTTGCCATTGA 1395 0.5427 MDRRIHGATTLRISLLLLLSAFPFLAFSDSPNPRLSVASSSSGQINSNSVLVALLDSHYTELAELVEKAMLLQTLEDTVGAHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQSLLMFHIIPTRMGSQALPTQTGSARHQTLFKSEFIHLANNGTGEWTVDRAKIIHPDVVSRPDGVIHGIERLLVPRSVQDDFNRRRSLQSITAVKPEGAPEVDPRTHRLKKPAPPVKPGSPPVLPIYDAMAPGPSLAPAPAPGPGGPHHHFNGEAQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNSVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEEEEKPVTRTVQPAKVVVKHRRGKLLEAACWMLGTLGQDSRFTTCH 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00529 464 Gene3D FAS1 domain 50 191 IPR036378 -
Accr13g00529 464 FunFam Fasciclin-like arabinogalactan protein 16 267 418 - -
Accr13g00529 464 SUPERFAMILY FAS1 domain 251 419 IPR036378 -
Accr13g00529 464 ProSiteProfiles FAS1/BIgH3 domain profile. 272 400 IPR000782 -
Accr13g00529 464 ProSiteProfiles FAS1/BIgH3 domain profile. 46 188 IPR000782 -
Accr13g00529 464 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 20 461 IPR044654 -
Accr13g00529 464 Gene3D FAS1 domain 291 418 IPR036378 -
Accr13g00529 464 SUPERFAMILY FAS1 domain 49 191 IPR036378 -
Accr13g00529 464 MobiDBLite consensus disorder prediction 211 237 - -
Accr13g00529 464 SMART fasc_3 85 191 IPR000782 -
Accr13g00529 464 SMART fasc_3 313 418 IPR000782 -
Accr13g00529 464 Pfam Fasciclin domain 58 190 IPR000782 -
Accr13g00529 464 Pfam Fasciclin domain 297 417 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00529 Accr-Chr13 5556553 5559221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00529 - - qsa:O6P43_028640 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03293 1 69515221 69517546 Accr13g00529 13 5556553 5559221 CCT