Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03246 ATGGGGATCTCTTTCGGTCCTACCAAACCCAAATCTCTGTGCACCCTCATAACAGTCTCCGTTTCATTCTGTGCTGTTTTCCACCTGGTATCGGTACTACATCTGCGCACTGGTGATCTAGACAACGTGCATCGTCTTTCATCAGAATATGCACCTGCACGGACCACTCTCGATCATGTCGTTTTTGGCCTCTCTACAACCATGGTTTCTTGGCCTGATCGGAAGGACAATGTCAGGCTATGGTGGAAACCTGGTCATACCAGAGGATGTGTGTTCGCCGACAGCCTCCCTCCTCATGAACACCGCCGTACCAACGACGATCCTTCTCTCCCTCTTCTCCGTGTCTCCCAAGATACTTCGCGTTTCCGTTACACTTTCAGGGGAGGTAATCGGTTGGCGATTCGAGTGGCACGCGTTGTTGCAGAGACTGTGGCTATGAATCATTCTAATGTGAGGTGGTATGTGTTTGGGGACGATGACACCATTTTCTTCCCGGAGAATCTCATCAAAACACTGTCAAAGTATGATCATCGGCTTTGGTACTATCTCGGCACTCAATCTGAGATTTACGAGCAGAACCATTTGTATAGCTTCGGAATGGCTTTTGGTGGAGCAGGCTTCGCTATCAGTTCCTCCCTAGCGAAAGTCTTAGCCAAGGTTTTTGATTCTTGTATAGAAAGATATCCCCATCTTTATGGAAGTGATGGGAGGGTCTTCTCTTGCATAACAGAGCTCGGTGTTGGCTTAACAAAGGAGCCCGGGTTTCATCAGGTTGATTTGCGGGGAGATATCTTTGGTCTATTGGCTGCACATCCAGTGAATCCCCTGTTATCCCTACATCACTTGGATTACACAGATCCAATCTTTCCCAACATGACCAGAAAACAGGCTCTGCAACATTTATTTAAAGCTGCGAATGTTGATTCCCAGAGGATTTTACAGCACACAGTTTGTTATGACAGATGGTTTTCATGGACAGTTTCAGTGTCATGGGGCTATGCAGTTCAGGTGTTCCCGTACCACATGTTTCTGCCAGATGCTCTGAACGTTCAACCAACGTTCAAGCAGTGGACTAGGAGAGGTCTTTTGTCAGGAGTATATACTTTCAACACCAGAGAACTTCACCCAGATCCATGTAGAAGACCCACCATTTTCTACTTTGATAGGGTGTCTTCTGGCAAGGATGGAAGAATCATTACCCATTATAAGAAAACCTTTCAAAACTGCTCATATGACGCGGCGTCGCCCAGGAAACTGGAAAAGATCACAGTTTTTACCAAGAAACTCGACCTTGACATCAAACAGTTGCAGGCTCCTAGAAGGCAGTGTTGTGATGTCTCGCGCTCTAGCCCTCGTCATTTAATGGAGATTACAATCAGAGAATGCAAAGACGAAGAATTGATCTCTGTGCATTGA 1416 0.464 MGISFGPTKPKSLCTLITVSVSFCAVFHLVSVLHLRTGDLDNVHRLSSEYAPARTTLDHVVFGLSTTMVSWPDRKDNVRLWWKPGHTRGCVFADSLPPHEHRRTNDDPSLPLLRVSQDTSRFRYTFRGGNRLAIRVARVVAETVAMNHSNVRWYVFGDDDTIFFPENLIKTLSKYDHRLWYYLGTQSEIYEQNHLYSFGMAFGGAGFAISSSLAKVLAKVFDSCIERYPHLYGSDGRVFSCITELGVGLTKEPGFHQVDLRGDIFGLLAAHPVNPLLSLHHLDYTDPIFPNMTRKQALQHLFKAANVDSQRILQHTVCYDRWFSWTVSVSWGYAVQVFPYHMFLPDALNVQPTFKQWTRRGLLSGVYTFNTRELHPDPCRRPTIFYFDRVSSGKDGRIITHYKKTFQNCSYDAASPRKLEKITVFTKKLDLDIKQLQAPRRQCCDVSRSSPRHLMEITIRECKDEELISVH 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03246 471 PANTHER FRINGE-RELATED 16 468 - -
Accr1g03246 471 Pfam Protein of unknown function, DUF604 192 444 IPR006740 -
Accr1g03246 471 Gene3D - 48 305 - -
Accr1g03246 471 FunFam Fringe-related protein-like 47 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03246 Accr-Chr1 69116264 69117870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03246 55 436 Glycosyltransferase AT1G05280 56.848 5.12e-163 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03246 - - gmx:100813816 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03246 1 69116264 69117870 Accr13g00587 13 6344091 6345706 CCT
Accr13g00586 13 6339380 6341799 Accr1g03246 1 69116264 69117870 CCT
Accr1g03246 1 69116264 69117870 Accr1g03246 1 69116264 69117870 ECH