Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00587 ATGCAGCATCTGAAAAACCCCACCAAAACCCAGTCTCTGATTAGCTTCATTTTGGTCTGTTCTTCATTTGGGGTCGTTTATCTTCTCGTATCATTGCTAGCTGTTCGTACTTCTAGGGTTGTACATGTTGTGCATTCTTCTTCTTCACAAGATGTGGCTGCGCGGACATCCCTTGATCACGTTGTGTTTGGAATTGCGTCAAGCATGAAATCTTGGCCTAAGCGAAAGGAGTATACGAAGCTATGGTGGAAACCTAATCAGATGAGAGGATGTGTGTTTGTGGAAAGCCTTTCAGCTGAAGAAGAACAGGGTAACAACATTGGTAGTTCTTCTCTTCCTCCTCTCTGTGTTTCCGAGGATACTTCAAGATTCCGTTACACCTACCGAGGTGGATCCCGGTCGGCCATCCGTGTGGCACGTGTTGTTGCAGAGACTGTTGCTCTGAATCATTCTGACGTAAGATGGTATGTGTTTGGGGATGATGACACAGTTTTCTTTCCAGAGAATTTGCTGAAGATTCTCTCTAAATATGATCATGAACTTTGGTACTATATCGGCGCACACTCGGAGAGCTACGAGCAAAACCGATTCTTTGGATTTGGAATGGCTTTTGGTGGAGCAGGTTTTGCCATAAGTTCCTCTCTAGCAAAGGTTTTAGCTAAGGTTTTTGATTCATGTATAGAAAGGTATCCTCATCTATATGGAAGTGATAGTAGGGTGTATTCTTGCTTGACTGAGCTAGGCGTTGGATTAACCCATGAACCTGGTTTTCACCAGGTTGATATGCATGGAAATATGTTTGGTCTATTAGCTGCACACCCTGTGACACCCTTGTTATCTCTCCATCACATGGATTATACAGACCCTATATTTCCAAACATGACAAGAACACAGGCTCTAGGACGTTTGTTTGAGGCTGCTAGTGTGGATTCTCAGAGGATGTTGCAACAAACAGTTTGTTATGACAGGTGGTATTCATGGACAATCTCGGTGTCATGGGGCTATGCCGTTCAGGTATTCCCGAATCATATGTTCTTGCCTGATGCTCTGAGCGTGCAACAAACATTCAGGCAGTGGAAAAAGGGAAATCCTTTTGCAGCTGCATTCACTTTTAACAAAAAAGACCCTCACCCTGACCCTTGCAAAAGACCCACCATTTTTCACCTGGATAGTTTGTCTTCAGGGGAGGATGTAATCATAAGTAATTACACCAGACATTATCAAAATTGCTCGTATGATCCCGCTTCTCCAAGGAAACTGGAAGCAATCAAAGTGGTTACGAATAAGCTAGACTTTAGCATAAAACAGTTGCAGGCTCCGAGAAGGCAGTGCTGTGATGTGTTGCCCCCTACAGCTAGTGACTTGATGGAAATTGCAATTAGAGAATGCAAAGAGGATGAATTGATTCACATGCATTGA 1419 0.4355 MQHLKNPTKTQSLISFILVCSSFGVVYLLVSLLAVRTSRVVHVVHSSSSQDVAARTSLDHVVFGIASSMKSWPKRKEYTKLWWKPNQMRGCVFVESLSAEEEQGNNIGSSSLPPLCVSEDTSRFRYTYRGGSRSAIRVARVVAETVALNHSDVRWYVFGDDDTVFFPENLLKILSKYDHELWYYIGAHSESYEQNRFFGFGMAFGGAGFAISSSLAKVLAKVFDSCIERYPHLYGSDSRVYSCLTELGVGLTHEPGFHQVDMHGNMFGLLAAHPVTPLLSLHHMDYTDPIFPNMTRTQALGRLFEAASVDSQRMLQQTVCYDRWYSWTISVSWGYAVQVFPNHMFLPDALSVQQTFRQWKKGNPFAAAFTFNKKDPHPDPCKRPTIFHLDSLSSGEDVIISNYTRHYQNCSYDPASPRKLEAIKVVTNKLDFSIKQLQAPRRQCCDVLPPTASDLMEIAIRECKEDELIHMH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00587 472 PANTHER FRINGE-RELATED 14 469 - -
Accr13g00587 472 Pfam Protein of unknown function, DUF604 194 445 IPR006740 -
Accr13g00587 472 Gene3D - 48 320 - -
Accr13g00587 472 FunFam Fringe-related protein-like 48 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00587 Accr-Chr13 6344091 6345706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00587 13 437 Glycosyltransferase AT1G05280 54.861 9.41e-168 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00587 - - qsu:112007791 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03246 1 69116264 69117870 Accr13g00587 13 6344091 6345706 CCT