Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03205 ATGGCGACCATTACTTCTGCGTCTTTCTCAGCATTAACTCAATGTTCTAAAAGAAAAGCGACTACGCCTTCGTCTTGTTTCCTGGGGTCGAACTCCAACGTCTCTCGGCTACGGATGAATTTTGCATATCATTGTGTCGGTATTCGAGCTTTGAAGCCCGCTCCCAAAATGGTTGTTCAATGCATGTCTTCTGTGACAGACATCACCCCTGTTTCTGAGACAAAGTTAAATTTCCTCAAGGCGTATAAGCGACCAATCCCTAGTATCTACAACACTGTGCTGCAGGAGCTCCTTGTCCAGGAACATTTAATGAGATATAAGAGATCATACCGCTATGACCCTGTATTTGCTCTTGGATTTGTCACTGTATATGATCAGCTCATGGAAGGATATCCTAGTGATGAGGATCGAGATGCCATCTTCAAAGCATACATCGAGTCATTGAAAGAAGATCCAACCCAATACAGAGTAGATGCACAGAAGTTGGAAGCGTGGGCTCGGACTCAAAATCCAACTTCCCTGGTTGATTTTTTGTCAAGAGAAGGAGAAGTTGAGGGAATATTGAAGGATATTGCAGAAAGAGCAGGGGGAAATGGGGCTTTTAGCTATAGTCGTTTCTTTGCTGTAGGCCTCTTTCGTCTCCTTGAGTTGGTAAATGCAACCGAACCAACAATTTTGGAAAAGCTTTGTGTGGCTTTAAACATTAACAAAAGAAGTGTAGATTCGAATTTGGAGGTGTACCGCAAGCTGATTTCCAAGTTGGTACAGGCAAAAGAGCTGTTGAAGGAATATGTTGACAGGGAGAAGAAGAAAAGAGAGGAAAGGGCTGGATCACAAAAGGCTAACGAGGCAATCACAACATGA 864 0.4329 MATITSASFSALTQCSKRKATTPSSCFLGSNSNVSRLRMNFAYHCVGIRALKPAPKMVVQCMSSVTDITPVSETKLNFLKAYKRPIPSIYNTVLQELLVQEHLMRYKRSYRYDPVFALGFVTVYDQLMEGYPSDEDRDAIFKAYIESLKEDPTQYRVDAQKLEAWARTQNPTSLVDFLSREGEVEGILKDIAERAGGNGAFSYSRFFAVGLFRLLELVNATEPTILEKLCVALNINKRSVDSNLEVYRKLISKLVQAKELLKEYVDREKKKREERAGSQKANEAITT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03205 287 Hamap Protein Thf1 [thf1]. 65 273 IPR017499 GO:0010207|GO:0015979
Accr1g03205 287 Coils Coil 247 274 - -
Accr1g03205 287 MobiDBLite consensus disorder prediction 268 287 - -
Accr1g03205 287 Pfam Thylakoid formation protein 71 275 IPR017499 GO:0010207|GO:0015979
Accr1g03205 287 NCBIfam photosystem II biogenesis protein Psp29 68 272 IPR017499 GO:0010207|GO:0015979
Accr1g03205 287 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 286 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03205 Accr-Chr1 68833256 68836479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03205 - - gmx:100814341 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03205 1 68833256 68836479 Accr13g00651 13 7323423 7326265 CCT
Accr1g03205 1 68833256 68836479 Accr1g03205 1 68833256 68836479 ECH