Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00651 ATGGCCGCTGTTACTTCTGTGTCCTTCTCCGCATTAACCCAATGTTCTGAAAGAAAGCCTGCTTTCTCTTCCACTCGCTTCCTCGGATTCAATTTGGCGGCATTACGGTTTCGGTCGAATATTTCTTATCACTATGCTGCTGTTGGAGCTTCCAATTCCACTTCTAAAATGATTATTCAATGCATGTCTTCTGCCACAGATGTTCCCACTGTAGCTGAGACAAAATATAATTTCCTCAAGGCATATAAACGTCCGATCCCTAGTATCTACAACAATGTGCTGCAGGAGCTCATTGTTCAGCAGCATTTAATGAGATACAAGAGATCATACCGTTATGACCCTATATTTGCCCTTGGTTTTGTCACTGTGTACGATCAACTCATGGATGGTTATCCTAGTGATGAAGATCGAGATGCCATCTTCCAAGCATATATCAAGGCATTGAAGGAAGAGCCAGAACAATATAGAATAGATGCACAGAAGTTGGAAGAGTGGGCACGGGCTCAGAATCCTAATTCCCTAGTCGAGTTTTCTTCCAGAGAAGGAGAGGTGGAAGGGATATTAAAAGATATTGCAGAAAGAGCAGGTGGAAATGGGGATTTCAGTTATAGTCGTTTCTTTGCAGTAGGCCTATTTCGACTTCTTGAGATGGCAAATGCAACAGAACCGGCCATTTTGGATAAGCTTTGTGCAGCTTTGAACATCAACAAGAGAGGTGTTGATCGGGATTTGGATGTGTACCGTAATCTGCTTTCCAAGTTGGTCCAGGCTAAAGAGCTGCTAAGGGAATACGTTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGACTGAATCTCAAAAGGCTAATGAGGCCATTTCAACATGTTTGGGACAGAGCATCAACTCTCTAGCCTCTAGACACTAA 903 0.4297 MAAVTSVSFSALTQCSERKPAFSSTRFLGFNLAALRFRSNISYHYAAVGASNSTSKMIIQCMSSATDVPTVAETKYNFLKAYKRPIPSIYNNVLQELIVQQHLMRYKRSYRYDPIFALGFVTVYDQLMDGYPSDEDRDAIFQAYIKALKEEPEQYRIDAQKLEEWARAQNPNSLVEFSSREGEVEGILKDIAERAGGNGDFSYSRFFAVGLFRLLEMANATEPAILDKLCAALNINKRGVDRDLDVYRNLLSKLVQAKELLREYVDREKKKREERTESQKANEAISTCLGQSINSLASRH 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00651 300 Pfam Thylakoid formation protein 70 275 IPR017499 GO:0010207|GO:0015979
Accr13g00651 300 Coils Coil 247 277 - -
Accr13g00651 300 NCBIfam photosystem II biogenesis protein Psp29 67 272 IPR017499 GO:0010207|GO:0015979
Accr13g00651 300 Hamap Protein Thf1 [thf1]. 65 273 IPR017499 GO:0010207|GO:0015979
Accr13g00651 300 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 293 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00651 Accr-Chr13 7323423 7326265 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00651 - - gmx:100814341 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03205 1 68833256 68836479 Accr13g00651 13 7323423 7326265 CCT
Accr13g00651 13 7323423 7326265 Accr13g00651 13 7323423 7326265 ECH