Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03190 ATGGAACCATTTCTAAGTTACAGCAATAGCAGCGCTAGCTATGACAGCAATAACAACGGCAACGATGGACAAGATATCATACGGTGGTTCGAAGAAGTAGCAGACGAGGCAGGTTCTGTTCAGACGCAGATCTTATCCCAGATTCTGAAGCAGAACCATAGGGTGGAATATCTCAACAAATGGCTGGGGGACTACAATATCCTCGACATGGACGCTACTGGATTGGAATATCTTTTCACTTCTGTCGTTCCCGTCGCCTCCCATGAAGATTTTGAGCCTTTTATCCAAAGGATTGCAGATGGCGAAACATCTCCCTTACTCACTCGACAACCCACCATTAACGCTCTCTCCTTAAGTTCCGGAACCACAGAGGGAAGGCAGAAGCTTGTGCCTTTCACCCGACACAGTGCCCAAACTACCCTTCAAGTCTTCACTTTGGCAGCAGCCTATAGATCAAGGGTATATCCCATAAGAGAAGGAGGTAGGATTCTTGAATTCATATACAGTAGCAATCAGTTTCACACTAAAGGAGGCTTAAGGGTAGGAACGGCCACAACACACTATTATGCAAGCGAAGAGTTCAAAATCAAACAGGAGAGAACAAAGTCATTCACTTGCAGCCCTGATGAGGTGATTTCAGGAGGAGACTACAAGCAATCCACATACTGCCACCTCCTCCTTGGCCTCTACTTCTCTCATCAAGTAGAGTTCATCTCTTCGGCCTTTGTCTATAGCATAGTGCAGGCCTTTCGCAGTTTTGAAGAACTTTGGAGGGATATTTGCAGAGACATTAAAGAAGCAAGTTTGAGCTCCAGAATCAAGGTACCCAAAATAAGAAAGGCTGTTTTGAATCTAATTTCCCCAAACCCATCTCTAGCTTTAAAAGTAGAAGCTGCTTGCTTGGAATTAGAAAAGGTGAATTGGTTTGGTGTGATTCCTAAACTTTGGCCAAATGTTAAGTATGTATATTCCATAATGACGGGGTCTATGCTGCCTTACCTGAAAAAGCTAAGACATTATGCAAATGAGTTGCCATTAGTAAGTGCTGACTATGGATCTACTGAGAGCTGGATTGGGGTTAATCTGGATCCTAGTTTGCCTCCGGAGAATGTAACATATGCTGTCGTACCTACTTTCTCTTACTTTGAGTTCATACCCCTCCATAGACAGAAGCAAGGTTGTACTTCAGTTGCTGATGATTTCAGGGAGGATTTGCCTATTCCACTATCTCAAGTTAAGGTTGGACAAGAGTATGAAATAGTCCTCACAACTTTCACTGGACTGTATAGGTGCAGGCTAGGGGACGTGGTGGAAGTAGGTGGATTTCACAAGGGGACCCCAAAGTTGAATTTCATATGCAGAAGGAAGCTAATACTGACAATAAACATAGACAAGAACACAGAGAAAGACCTCCAGATAGTGGTGGAAAAAGGGTCGGATCTGCTGAACAAGGAGGAAGCAGAGGTGGTGGACTTCACCAGCTATGCAGACGTGTCGAAGCCACCAGGGCACTACGTCATATACTGGGAGATCAAAGGCCATGTGGATGACAAGCTCCTTCATAGCTGTTGCACCCACATGGATGCGTCCTTCGTCGACCGTGGCTACGTGGTGTCCCGCAAGACCCACGCCATTGGGCCCCTCGAACTCCGAGTCGTCCAGAGAGGCACCTTCAAGAGAATTCTCGACCACTTCGTCGCCACTGGCGCTACCATCGGCCAGTTCAAGACCCCCAGGTGCACCACTGACCCTGGCCTCCTCAATATCCTCTCTGCCTCCACCATTAGGACCTTTCGCAGCACTGCCTATGCTTAG 1815 0.4661 MEPFLSYSNSSASYDSNNNGNDGQDIIRWFEEVADEAGSVQTQILSQILKQNHRVEYLNKWLGDYNILDMDATGLEYLFTSVVPVASHEDFEPFIQRIADGETSPLLTRQPTINALSLSSGTTEGRQKLVPFTRHSAQTTLQVFTLAAAYRSRVYPIREGGRILEFIYSSNQFHTKGGLRVGTATTHYYASEEFKIKQERTKSFTCSPDEVISGGDYKQSTYCHLLLGLYFSHQVEFISSAFVYSIVQAFRSFEELWRDICRDIKEASLSSRIKVPKIRKAVLNLISPNPSLALKVEAACLELEKVNWFGVIPKLWPNVKYVYSIMTGSMLPYLKKLRHYANELPLVSADYGSTESWIGVNLDPSLPPENVTYAVVPTFSYFEFIPLHRQKQGCTSVADDFREDLPIPLSQVKVGQEYEIVLTTFTGLYRCRLGDVVEVGGFHKGTPKLNFICRRKLILTINIDKNTEKDLQIVVEKGSDLLNKEEAEVVDFTSYADVSKPPGHYVIYWEIKGHVDDKLLHSCCTHMDASFVDRGYVVSRKTHAIGPLELRVVQRGTFKRILDHFVATGATIGQFKTPRCTTDPGLLNILSASTIRTFRSTAYA 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03190 604 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 23 603 IPR004993 -
Accr1g03190 604 Pfam GH3 auxin-responsive promoter 29 583 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03190 Accr-Chr1 68692468 68697272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03190 25 601 EF-hand Containing Proteins AT1G23160 35.811 1.22e-122 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03190 K14487 - gmx:100792358 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03190 1 68692468 68697272 Accr13g00681 13 7569037 7571822 CCT
Accr1g03190 1 68692468 68697272 Accr1g03190 1 68692468 68697272 ECH