Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00681 ATGGAACCAGTACTTCTCAGAGACAGCAATGGCAGCAGCACCAGCCATGACTGTGGTATCATAACCTGGTTTGAAGAAGTGACCAAAAACGCTGGTTCTGTTCAGACTCAGATGCTATCCAAGATTCTGAAGCAGAACTATGGAGTTGAATACCTCAAGAAATGGCTCGGAAACTATAATATTCAAGACATGGATGACGACTCTGCATTGGAATCGCTTTTCACTTCTGTGGTTCCTCCGGCGTCACATGCAGATTTTGAGCCCTTTATACAGAGAATAGCTGATGGGGACACAACCCCTTTACTCACTCAACAATCCATAACCACCCTTTCTTTAAGTTCAGGAACCACCGAGGGGAGGCAAAAGTTTGTACCTTTCACTCACCATAGCGCACAGACTACCCTCCAAATTTTCACTTTAGCAGCAGCTTATAGATCAAAGGTTTATCCCACTAGAGAAGGAGGGAGGATTTTAGAATTCATATACAGCAGCAAGCAGTTCAAAACAAAAGGAGGCTTAACAGTAGGAACAGCAACAACGCACTACTATGCAAGCCAAGAGTTCAAGATCAAGCAAGAGAAAACAAAGTCGTTTACTTGCAGCCCATATGAAGTAATCTCAGGAGGAGATTACAAACAAGTCACTTACTGTCACCTCCTTCTTGGCCTTTTTTACTCTGAACAAGTAGAGTTCATTACATCAGCTTTTGTCTACAGCACAGTCCAAGCCTTTCGAAACTTTGAAGAGCTTTGGAGAGAAATATGCTGTGACATCAAAAATGGTACTCTCAGTTCCAGAATCCAAATACCCAGAATGAGAAACTCTGTTTTGGAGATTCTCTCAGAACCAAACCCATCTTTGGCTTCCAAAATAGAAGCTAAATGCCAGGAACTAGAGAAGGTGAATTGGTTTGGTTTGATTCCTACGCTGTGGCCAAATGCTAAGTATGTGTATTCCATAATGACAGGATCTATGGAGCTATATTTGAAAAAGCTGAGGCATTATGCGAATGAGTTGCCATTAGTGAGTGCTGATTATGGATCTACAGAGAGCTGGATTGGGGTTAATGTGGACCCTGGTTTGCCTCCTGAGAATGTTACTTTTGCTGTAGTTCCAACTTTCTCTTACTTTGAATTCATACCGCTTCACAGATCCCAGGAATCAAAAGAATGCAATTCTGTTAGTGATGATTTCGTGGAAGACAAGCCAATCCCATTGTCCCAGGTTCAAGTTGGTCAGAAATATGAAATAGTCCTCACAACTTTCACTGGGCTATACAGGTGCAGATTAGGGGACGTGGTGGAAGTAGCTGGGTTTCACAACAGGACTCCAAAGTTGAACTTCATTTGCAGAAGGAAGCTAATTTTAACTGTGAACATAGACAAGAACACAGAGAAGGACCTGCAACTAGTGGTAGAGAGGGGCTCGCAGCTCCTTAGCTCGGCTCAAAAGAAAGCCGAGCTAGTGGACTTCACGAGCTATGCTGACGTGTCAAACCAACCAGGACACTACATTATATACTGGGAAGTCAAAGGAGAGGTTGAGGACGAGGTTCTTGGTCAGTGTTGCAGGGAGATGGACGAAGCTTTTGCAGATCATGGATATGTTGTGTCTAGGAAGACTAGATCCATTGGACCTCTTGAGCTTCGCTTGGTGGAGAGAGGAACTTTCAAGAAGATTCTAGATTACTTTGTTGCTAATGGCTCTGCTTTGAGCCAGTTTAAGACTCCTAGGTGCACTAACAATCAAGTGCTTCTCAAGATTCTGAACACTTGCACTGTGAAAAGTGTTCGCAGCTCTGCTTATGGTTCGTAG 1815 0.4336 MEPVLLRDSNGSSTSHDCGIITWFEEVTKNAGSVQTQMLSKILKQNYGVEYLKKWLGNYNIQDMDDDSALESLFTSVVPPASHADFEPFIQRIADGDTTPLLTQQSITTLSLSSGTTEGRQKFVPFTHHSAQTTLQIFTLAAAYRSKVYPTREGGRILEFIYSSKQFKTKGGLTVGTATTHYYASQEFKIKQEKTKSFTCSPYEVISGGDYKQVTYCHLLLGLFYSEQVEFITSAFVYSTVQAFRNFEELWREICCDIKNGTLSSRIQIPRMRNSVLEILSEPNPSLASKIEAKCQELEKVNWFGLIPTLWPNAKYVYSIMTGSMELYLKKLRHYANELPLVSADYGSTESWIGVNVDPGLPPENVTFAVVPTFSYFEFIPLHRSQESKECNSVSDDFVEDKPIPLSQVQVGQKYEIVLTTFTGLYRCRLGDVVEVAGFHNRTPKLNFICRRKLILTVNIDKNTEKDLQLVVERGSQLLSSAQKKAELVDFTSYADVSNQPGHYIIYWEVKGEVEDEVLGQCCREMDEAFADHGYVVSRKTRSIGPLELRLVERGTFKKILDYFVANGSALSQFKTPRCTNNQVLLKILNTCTVKSVRSSAYGS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00681 604 Pfam GH3 auxin-responsive promoter 23 583 IPR004993 -
Accr13g00681 604 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 20 601 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00681 Accr-Chr13 7569037 7571822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00681 24 600 EF-hand Containing Proteins AT1G23160 35.195 1.29e-119 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00681 K14487 - gmx:100792358 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03190 1 68692468 68697272 Accr13g00681 13 7569037 7571822 CCT
Accr13g00681 13 7569037 7571822 Accr13g00681 13 7569037 7571822 ECH