Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03059 ATGATGAATGATGATCAGAAACCGCAGCAAGCCGGCGGTGTTCGGTCCGGTCGGGCCAATGGGTTTTTCCCCAGCTCGCTCCGGGCTATCTCCAGCTACCTCAGGGTCGTTTCCTCCGGTGCTTCCAACGTTGCTCGGTCGGCAGCATCAGCTGCGTCCATGATTGTGGATAGGGATGATGACGCCAATTCTGATCAGGTCATCTGGGCTGGTTTTGATAAATTAGAGGGCGAGCGAGAAGTCACCCGTCAAGTTCTACTTCTAGGATTTCGGTCTGGCTTCCAGGTTTGGGATGTTGAAGATTCACATAATGTACATGACCTAGTTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGTTGCCAAATCCAATTGCATCAAAGAGATCAGCAGGGAAGTTTGCTTACAGCCGCCCACTGCTAGCTGTGTGTGCTGATGGTTTCTTTGCTGGAGGCAGTAACGTTCAGGATGGACTGACCACCCCTTACAATGGGAGCACTTCCAATTTCCATGAGCAATTAAATGGAAATTATCTGCCAACGACTGTTCAGTTTTATTCCATGAGATCCCAATCATATGTCCATGCACTAAAATTTAGATCAGTTGTTTATACTGTAAGGTGCAGTTCTCGGATAGTTGCTGTTTCTCAATCAACTCAGATACACTGTTTTGATGCTGCAACATTAGAAAGAGAGTATACTATACTTACCAATCCTATAGTTGCAAGTTGTCCTGGTTCTGGAGGTGTAGGCTATGGACCACTTGCAGTGGGTTCAAGATGGCTGGCTTATAGTGGAAGTCCAGTCACAATATCTAATTCTGGGCATGTCAATCCGCAAGACTTGACAACTTCACCAAGCTTTCCTGGTTTTTCTTCAAATGGGAGCTTGGTTGCACACTATGCCAAAGAATCAAGCAAGCAACTTGCTTCTGGAATTGTGTCCCTTGGAGATATGGGGTATAAGAAACTTTCCCGATACTACTCTGAGCTTCTGTCTGATGGCAATAGTCCATCACGATCTTTAACTTCAGGCTGGAAGGGCAATGGAACCATTAATGGACATTCAGCGGATGCTGATAACATTGGAATGGTCATTGTAAAGGATATTGTCAGTAAAAATGTAGTTACTCAACTGCGAGCCCACAGAAGTCCTATTTCAGCCTTACGCTTTGATCCCAGTGGAACCATTTTGGTGACTGCTTCAGTTCAGGGGCATAGTATAAACGTATATAAGATAATGCCTTGTCACTCAGAGGCACCTGATACTGGCCCTTCTAATGTTCATCTCTACAAGTTGCAACGTGGCTATACTAATGCAATAATACAAGATATTAGTTTCAGCGATGACAGCAATTGGATTATGATAAGTTCCTGTAGGGGCACTAGCCATATATTTGCTATAAATCCTCTGGGAGGATCTGTGGATATTCAAGCCCTTGATTGTAGTCTTCCAACACAAGATAACGGATTGGGTGGTATTACTAGTCAAGGAGTCCTTTATCCTCATAGTTCGGCCTTGCAAATGCATAAAAAGCAGAGCCTATGTGCAACTGGCCCACCAATCCCTCTTTCTGTTGTTAGCAGAATTAGGAATGGAACTAATGGCTGGAGAGGTTCTGTGAGCGGTGCTGCTGCAGCTGCCACAGGAAAGACGAGTTCCCTTTCTGGGGCTATTGCTTCATCTTTCTGTAACTGTAAGGGCAGTGGCATCTATATTGATGGGAAGCATTCCAAGACCAAGTATCACTTGTTGGTTTTTTCATCCTCTGGCTCTATGATACAATATGCTCTACGGATGTTAAATGGTCGAGATTCAGCTATTGTTTCTGGATTAAACCCTGCTTATGAATTAGCTCCACAAATTGATGCAAGATTAGTAGTGGAAGCTATTCAAAAATGGAATATATGTCAAAGACCAAGTTTGCGGGAGCGAGAAGATAACATTGACATATATGGTGATAATGGAATTCCTGACGACAATAAAATTTATCCTGAGGAATCAAAAGAGGACACTGTCAGTGTCCCAAAATTCAAGAATGAAGTGGTCAAAGTAAATTCCTCTTTAGAGGAAGATCGTCATCTGTATATTTCCCAAGCTGAACTGCAGATGCACCAAACTCAGACTCCATTGTGGGCAAAGTCTGAGATATATTTTCATTCAATGGTGAAAGAAGCTACCATAATAGATGAAGTAGCTGCTGCAGGAGGGGAAATTGAGATTGAAAGGATTCCAACTCGCATGATTCAAGCTAGGTCAAAACACTTAATTCCTGTTGTTGACCATCTTCAGACCCCAAAAATCCAACAAACAAGGGCCTATGCTCTGGATGGCAGGGTAAATGAACAACTGTTACATCAAAGTACTGACATGTCTGAAAATGGCACGATTTCAGACTGCACAACAAACTCTACTGAATTGGATAATGGCATTCAAGTACCTGGGTTGGGTGATCATCTTCTGCCAACAAGAACAAGAGTCTATGTAAATAAAAATAACTCCCCAAAGCCAAATACTCAGTTTAAGATTGTAAATAATAGAATAGAGCACTTCAACATGGAAGGTCAACTCAAGTTTGTAAATAGTGACAGAGAAGGCCTGCTAATGGGGAATCACATTGAGGATTAA 2631 0.4276 MMNDDQKPQQAGGVRSGRANGFFPSSLRAISSYLRVVSSGASNVARSAASAASMIVDRDDDANSDQVIWAGFDKLEGEREVTRQVLLLGFRSGFQVWDVEDSHNVHDLVSRHDGPVSFMQMLPNPIASKRSAGKFAYSRPLLAVCADGFFAGGSNVQDGLTTPYNGSTSNFHEQLNGNYLPTTVQFYSMRSQSYVHALKFRSVVYTVRCSSRIVAVSQSTQIHCFDAATLEREYTILTNPIVASCPGSGGVGYGPLAVGSRWLAYSGSPVTISNSGHVNPQDLTTSPSFPGFSSNGSLVAHYAKESSKQLASGIVSLGDMGYKKLSRYYSELLSDGNSPSRSLTSGWKGNGTINGHSADADNIGMVIVKDIVSKNVVTQLRAHRSPISALRFDPSGTILVTASVQGHSINVYKIMPCHSEAPDTGPSNVHLYKLQRGYTNAIIQDISFSDDSNWIMISSCRGTSHIFAINPLGGSVDIQALDCSLPTQDNGLGGITSQGVLYPHSSALQMHKKQSLCATGPPIPLSVVSRIRNGTNGWRGSVSGAAAAATGKTSSLSGAIASSFCNCKGSGIYIDGKHSKTKYHLLVFSSSGSMIQYALRMLNGRDSAIVSGLNPAYELAPQIDARLVVEAIQKWNICQRPSLREREDNIDIYGDNGIPDDNKIYPEESKEDTVSVPKFKNEVVKVNSSLEEDRHLYISQAELQMHQTQTPLWAKSEIYFHSMVKEATIIDEVAAAGGEIEIERIPTRMIQARSKHLIPVVDHLQTPKIQQTRAYALDGRVNEQLLHQSTDMSENGTISDCTTNSTELDNGIQVPGLGDHLLPTRTRVYVNKNNSPKPNTQFKIVNNRIEHFNMEGQLKFVNSDREGLLMGNHIED 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03059 876 Gene3D - 82 492 IPR015943 GO:0005515
Accr1g03059 876 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 19 792 IPR045142 GO:0006914
Accr1g03059 876 Pfam Breast carcinoma amplified sequence 3 520 759 IPR022175 -
Accr1g03059 876 SUPERFAMILY WD40 repeat-like 84 470 IPR036322 GO:0005515
Accr1g03059 876 SMART WD40_4 373 413 IPR001680 GO:0005515
Accr1g03059 876 SMART WD40_4 427 468 IPR001680 GO:0005515
Accr1g03059 876 SMART WD40_4 191 226 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03059 Accr-Chr1 67458215 67463936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03059 - - gmx:100784596 1150.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03059 1 67458215 67463936 Accr13g00860 13 9786453 9791318 CCT
Accr1g03059 1 67458215 67463936 Accr1g03059 1 67458215 67463936 ECH