Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00860 ATGAGGAAAGATGACCAGAAACTACATCAGGGAGGCGCAATGCCTCGGTCAGGGCGAACCAATGGATTAATTCCGAGCTCTTTTCGTGCTCTCTCAAGCTACCTGAGGGTCGTTTCCTCTGGCGCTTCCACTGTTGCGCGGTCTGCAGCATCGACTGCTTCTTCGTTTCTTGATAGGGATAGTGACGCTGACCATGATCAGGTTATCTGGGCTGGGTTTGACAAGTTAGAGGTGGAAGGATATGACATCCGACAAGTTCTTCTTTTATGCTATCGAACTGGGTTCCAGGTTTGGGATGTTGAAGATGCCAAAAATGTGCGCGACCTGGCTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGCTATCAAATCCAATTTCATCAAAGAGATCAGAAGATAAGTTTGCAGACAGCCGTCCACTGTTGGTTCTTTGTACTGATGGAATTTATGCTGGAGGCAGTACCAATAAGAATGGTTTTGCCTCCCATTGCAATGGAAGCACCTTAAACTGCCATGACCAAGTGAATGGCCTTTATCTGCCAACTACTGTTCAGTTTTATTCTTTGAGATCCCAATCATATGTAGATGTGTTAAAGCTTAGATCAGCTATATATTCTGTTAGGTGCAGTTCTCGTGTTGTTGCTGTTGCTCAATCCACTCAGATACACTGTTTCAGTGCCACTACATTAGAAAGGGAATATACTCTGCTTACCAATCCAATTGTCATGAGCTGTCCTGTTTCTGGAGGTATAGGCTATGGACCACTGTCGGTCGGTCCAAGATGGCTGGCTTATAGCGGAAGCCCAGTTGTTGTCTCAAATTCTGGTCGTGTCAATCCTCAACATTTAACACCTTCTGCAAGCTTTCCTAGTTTTTCTTCGAACGGTAGCTTGGTTGCACACTATGCCACAGAGTCCAGCAAGCAACTTGCTGCGGGAATAGTCACACTTGGAGATATAGGGTATAAGAAGCTTTCTAGGTACTGCTCTGAGCTACAACCTGATGGCAATGGTTCTTCACCATCTTTAAATTCCAGCTGGAAGGGCAATGGAATCAGTAATGGCCATTTGGGGGATTTGGATAATATTGGAATGGTTATTGTCAAAGACATTGATAGTAAAGATGTTGTTGCTCAATTCCAAGCCCATAAAAGTCCTATTTCAGCCTTATGCTTTGATCCTAGTGGCACTATTTTAGTGACTGCATCAGTTCAGGGGCATAACATTAATGTTTTTAAGATAATGCCTGGACACTCCGACAGTTTAGCATCTGATGGTAGTCCTACACATGCTCATCTTTACAGGCTACAACGTGGCTTTACAAATGCAGTAATTCAAGATATCAGTTTCAGTGATGACAGCAACTGGATTATGGTTAGTTCCTCAAGAGGTACTAGCCATTTGTTTGCCATAAATCCTCTAGGAGGATCTGTAAATATTCAGTCCTATGATGCAAGTTTTACATCCAAAAATGGTGGATTGGGTGTTATGACTGACCCAACAGTTCGGTGGCCTCCTAATTCAAGCCTACAAATTCCTAAGCAACAAAGTTTGTGTGCAGCTGGGCCTCCGGTCACACTTTCTGTTGTATGCAGAATTAGAAATGGAAATAATGGCTGGAGAAGCACTGTAAGTGGTGCAGCCGCTGCTGCGACAGGTAAGACAAGCTTCCAGTCTGGAGTTATTGCTTCGTCCTTTTGTAACGGCAAAGGGAGTGCACTGTATGTTGATGGGAACCTTATAAGGACAAAATATCACTTGTTGGTTTTTTCATCCGCTGGTTCTATGATACAATATGCTCTGGGCAAATCAATGGGTCAGGATTCAGTTGTTTCTGGATTAACCCAGGCACATGAATCTGCATTAGAGGTTGACTCAAGGTTGGTTGTTGAGGCTATTCAGAAATGGAACATATGCCAGAGACACACTCGAAGAGAACGAGAAGATAATGTAGACATATATGGTGAAAATGGAACTTTGGATAGCAACAAAATATATCCTGTGAAGATGAAGGATGAGAATATCAACAAGTCAAAACTTGAGAATGTAATCATGAAAGTGAATTCTCATCCTAAGGATGAGCGTCATTTTTCAGGAGCAGAATTTAAGACCCACCAAACTCAAACTCCAGTGTGGGCGAAGCGAGAGATATATTTTCATTCAATGGTGAAAGAGGAAGGCATATTGAGTGAAGAAACTGCTTCAGAAGGGGAAATTGAGATTGAAAATATTTCAACGCATGTTATTGAAGTTAGGGCCAAGAACTTGGTTCCAATTGTTGACTATCTTCAGCCACAAAATTCCCATGAAACAAGGACTCCTGCTGTAAATGGTGAAGTAAATGAACCACGGCTACATCTGAATTCTGGGATTCATGAAAAAGACACAATTTCAGAGAGAGGTAACTCGGACTCTAATGACAGTGATGTTGAAGGGGCGGAGTGGAATGATCATCGAGGATCACTGGAAACTAACGGCTTTGTAAATAAGAATAACAATGACACCCTGGTAGCCAATACTTGCCATGAGGTTGTAAATAATAGAGAGCACTCAAACATGGAGGCTCAACTCATGCCTGTAAATAGTAACAAAGAAGGCTTGAAAATGGAGAATCACTTTGAAGAAGACAACTTGAATTAA 2643 0.423 MRKDDQKLHQGGAMPRSGRTNGLIPSSFRALSSYLRVVSSGASTVARSAASTASSFLDRDSDADHDQVIWAGFDKLEVEGYDIRQVLLLCYRTGFQVWDVEDAKNVRDLASRHDGPVSFMQMLSNPISSKRSEDKFADSRPLLVLCTDGIYAGGSTNKNGFASHCNGSTLNCHDQVNGLYLPTTVQFYSLRSQSYVDVLKLRSAIYSVRCSSRVVAVAQSTQIHCFSATTLEREYTLLTNPIVMSCPVSGGIGYGPLSVGPRWLAYSGSPVVVSNSGRVNPQHLTPSASFPSFSSNGSLVAHYATESSKQLAAGIVTLGDIGYKKLSRYCSELQPDGNGSSPSLNSSWKGNGISNGHLGDLDNIGMVIVKDIDSKDVVAQFQAHKSPISALCFDPSGTILVTASVQGHNINVFKIMPGHSDSLASDGSPTHAHLYRLQRGFTNAVIQDISFSDDSNWIMVSSSRGTSHLFAINPLGGSVNIQSYDASFTSKNGGLGVMTDPTVRWPPNSSLQIPKQQSLCAAGPPVTLSVVCRIRNGNNGWRSTVSGAAAAATGKTSFQSGVIASSFCNGKGSALYVDGNLIRTKYHLLVFSSAGSMIQYALGKSMGQDSVVSGLTQAHESALEVDSRLVVEAIQKWNICQRHTRREREDNVDIYGENGTLDSNKIYPVKMKDENINKSKLENVIMKVNSHPKDERHFSGAEFKTHQTQTPVWAKREIYFHSMVKEEGILSEETASEGEIEIENISTHVIEVRAKNLVPIVDYLQPQNSHETRTPAVNGEVNEPRLHLNSGIHEKDTISERGNSDSNDSDVEGAEWNDHRGSLETNGFVNKNNNDTLVANTCHEVVNNREHSNMEAQLMPVNSNKEGLKMENHFEEDNLN 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00860 880 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 17 849 IPR045142 GO:0006914
Accr13g00860 880 MobiDBLite consensus disorder prediction 789 819 - -
Accr13g00860 880 SUPERFAMILY WD40 repeat-like 86 473 IPR036322 GO:0005515
Accr13g00860 880 SMART WD40_4 374 414 IPR001680 GO:0005515
Accr13g00860 880 SMART WD40_4 430 471 IPR001680 GO:0005515
Accr13g00860 880 Pfam Breast carcinoma amplified sequence 3 523 759 IPR022175 -
Accr13g00860 880 MobiDBLite consensus disorder prediction 1 23 - -
Accr13g00860 880 FunFam Breast carcinoma-amplified sequence 3 293 523 - -
Accr13g00860 880 MobiDBLite consensus disorder prediction 789 832 - -
Accr13g00860 880 Gene3D - 354 504 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00860 Accr-Chr13 9786453 9791318 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00860 - - qlo:115955563 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03059 1 67458215 67463936 Accr13g00860 13 9786453 9791318 CCT
Accr13g00860 13 9786453 9791318 Accr13g00860 13 9786453 9791318 ECH