Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01763 ATGTCTGGGCCGCTGGATCGTTTCACGAGACCTTGCTTTGAGGGATTCTCTGGAAGTGATGAAAGACGGGACAGGAGATCTGATTTTGAGAACTCTGAGGATGAAAGACGAACAAGAATTGGTTCTCTAAAAAAGAAAGCAATTAATGCTTCTACTAAATTCAAGCATACTCTCAAGAAAAAGAGTGGCAAGAGAAAAAGTGATGGCAGGGTTAGTTCTGTTTCTATCGAGGATGTTCGGGATGTTGAGGAACTACAGGCTGTTGATGCCTTCAGACAGTCATTGATTATGGATGAATTGCTTCCAGAAAAACATGATGATTACCATATGATGTTAAGGTTCCTAAAAGCAAGGAAATTTGATGTTGAAAAAGCGAAGCACATGTGGGCCGATATGCTCAAATGGAGGAAAGATTTTGGTGCTGACACTATAATGGAGGATTTTGAGTATAAGGAGTTAAATGATGTTCTGGATTATTACCCTCATGGTCATCATGGTGTTGATAAGGAGGGAAGACCAGTTTATATTGAAAGACTTGGAAAGGTTGATCCGCACAAACTTATGCAAGTGACAAATATGGAGAAATATGTAAAGTACCATGTACAAGGGTTTGAGAAAGTTTTTGCAATTAAGTTTCCTGCCTGCACCATTGCTGCCAAGAGGCACATAGATTCTAGCACCACTATCTTAGATGTTCAAGGCGTGGGTTTGAAGAACTTTTCAAAGTCTGCCCGGGAACTCATTATGCGATTGCAAAAGATTGATGGAGACAATTACCCTGAGACTCTCTACCAAATGTTTATTATAAATGCTGGCCCTGGATTCAGGCTACTGTGGAACACTGTCAAAACCTTCATCGATCCCAAAACAACTTCTAAGATCCATGTTCTTGGAAACAAGTACCAGAGCAAATTGCTTGATATAATTGATGCCAGTGAGTTGCCAGATTTTCTTGGTGGCACCTGCACTTGTGCAGATCTGGGAGGATGCCTTAGATCTGACAAAGGGCCTTGGAAGAATCCTGAAATATTGAAGATGGTTCTCAAGGGTGGAGCCCGGGGAGCTAGGCAAGTAGTAAAAGTTCTAAACAGCGAAGGGAAGGTTATTGCATATGCTAAACCTCGATATCCAATGGTAAAAGGCAGTGATACATCCACGGCTGAATCAGGGTCTGAAGCAGAAGATGTTGCTTCTCCTAAAGCTATGAAGAGTTGCTCACATCTTAGGTTGACCCCTGTTCGTGAGGAAGCTAAGGTAGTTGGAGAGACAAGCTATGCCGGTAGCTTATCAGGGTATGATGAGTATGTTCCAATGGTGGACAAATCTGTTGATGCTAGCTGGAATAAGCAATCTCTATCGAGATCTTGTACTTCTAAAGGATTGCCTCCTGTCGTTGACATTCAGACAACTCCAGTCGCACGTCGCATGACCAACAAACACCCCACAATATCAGCCAATGATAGTCAGAGTACTTCTGATCCAACTCTTGATGCAACAAACAGGGACTGTGATCTTCCTTCACCATGTTCAGCAGCCCATACAGAAGCAGACCAACTTTCCTTCATGCTAAAGAAATTGGGTGAGCTTGAAGAGAAGGTTGACACACTCCAATCTAAGCCATCTGAGATGCCTAATGAGAAAGAGGAATTATTGAATGCTGCTGTCTGTCGTGTGGATGCTTTGGAAGCAGAGCTGATTGCTACTAAAAAGGCCCTCTATGAAGCCTTAATAAGGCAAGAGGAACTGCTTGCCTACATTGATCGTCAAGCAGAAGCGAAGTTACGGAAAAAGAAGTTTTGCTGGTGA 1806 0.4264 MSGPLDRFTRPCFEGFSGSDERRDRRSDFENSEDERRTRIGSLKKKAINASTKFKHTLKKKSGKRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPEKHDDYHMMLRFLKARKFDVEKAKHMWADMLKWRKDFGADTIMEDFEYKELNDVLDYYPHGHHGVDKEGRPVYIERLGKVDPHKLMQVTNMEKYVKYHVQGFEKVFAIKFPACTIAAKRHIDSSTTILDVQGVGLKNFSKSARELIMRLQKIDGDNYPETLYQMFIINAGPGFRLLWNTVKTFIDPKTTSKIHVLGNKYQSKLLDIIDASELPDFLGGTCTCADLGGCLRSDKGPWKNPEILKMVLKGGARGARQVVKVLNSEGKVIAYAKPRYPMVKGSDTSTAESGSEAEDVASPKAMKSCSHLRLTPVREEAKVVGETSYAGSLSGYDEYVPMVDKSVDASWNKQSLSRSCTSKGLPPVVDIQTTPVARRMTNKHPTISANDSQSTSDPTLDATNRDCDLPSPCSAAHTEADQLSFMLKKLGELEEKVDTLQSKPSEMPNEKEELLNAAVCRVDALEAELIATKKALYEALIRQEELLAYIDRQAEAKLRKKKFCW 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01763 601 Pfam CRAL/TRIO, N-terminal domain 103 131 IPR011074 -
Accr1g01763 601 MobiDBLite consensus disorder prediction 1 42 - -
Accr1g01763 601 Coils Coil 519 539 - -
Accr1g01763 601 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Accr1g01763 601 Gene3D - 140 350 IPR036865 -
Accr1g01763 601 SMART sec14_4 152 323 IPR001251 -
Accr1g01763 601 MobiDBLite consensus disorder prediction 475 498 - -
Accr1g01763 601 FunFam SEC14 cytosolic factor 140 352 - -
Accr1g01763 601 CDD SEC14 153 321 IPR001251 -
Accr1g01763 601 Gene3D - 75 139 - -
Accr1g01763 601 PRINTS Cellular retinaldehyde-binding protein signature 312 321 - -
Accr1g01763 601 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Accr1g01763 601 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Accr1g01763 601 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 26 589 - -
Accr1g01763 601 MobiDBLite consensus disorder prediction 475 500 - -
Accr1g01763 601 SUPERFAMILY CRAL/TRIO domain 152 346 IPR036865 -
Accr1g01763 601 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Accr1g01763 601 SUPERFAMILY CRAL/TRIO N-terminal domain 82 148 IPR036273 -
Accr1g01763 601 Pfam CRAL/TRIO domain 159 320 IPR001251 -
Accr1g01763 601 MobiDBLite consensus disorder prediction 16 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01763 Accr-Chr1 47748461 47755839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01763 86 317 Acyl Lipid Metabolism Gene Families AT5G47730 30.041 5.77e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01763 K26544 - fve:101312875 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01763 1 47748461 47755839 Accr1g01763 1 47748461 47755839 ECH
Accr1g01763 1 47748461 47755839 Accr10g00008 10 151486 156936 ECH