Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01104 ATGGAGGTCTTGGTGTCATTGTGCCTAATACTTCCTTTGTTGTATTCTTTCTTCACCCTTTTTAAGATGATCCTTCGACGGCGAGGCCAGAGCTGCTACATGCTGGCCTACGAGTGCTTCATGCCACCGGAGGACACAAAGCTGGACACGGACTCCGCCGCGAGGATTGTGCTGAGGAACAAGAAGCTAGGGCTTGAGGAGTACAGGTTTCTGCTCAAAACCATGGTGAGCTCAGGTATAGGAGAGAACACTTACTGCCCTAGGAACGTCTTAGAAGGACGAGAGGAGTTTCCGACCCTTGACGATTCCTACGGCGAGATCGACGAGATCATGTTTGACACTCTCGATGGACTCTTCAAAAAGACTCAGTTCTCTCCCTCAGACATTGACATCCTTGTGGTTAACGTGTCTTTGTTCTCTCCTGCACCTTCCCTCACAGCTCGTATTATAAACAGGTACAAAATGAGGGAGGACATCAAGGCGATTAACTTGGCCGGAATGGGGTGTTCGGCAAGCGTGGTGGCCATCGACGTGGTGCAGCGGATGTTCAAGAGCCATCCGAACTTTCTGGCCGTAGTCGTAAGCACCGAAGATCTTGGTGCTCACTGGTACTGTGGCAGCAACAAGATGCTGATGCTCTCAAACTGTCTCTTCCGCTCCGGGGGATGCTCCATGCTCTTCACCAACAAGTCCTCCCTCAAGCACCGTGCCATCTTGAAGCTCAAACACATGGAAAGAACCCAGTTTGGTGCAAATGATGAAGCCTATAGCTGCTGCATGCAGGTTGAAGACGAACTTGGCTACCAAGGGTTCCAACTCACAAAGAGTCTTGTAAAATCTGCAGCACAAGCCTTAACTGTGAACTTACAGACTATGGCCCCAAAGATTCTCCCTCTCTGGGAACTCATTCGCTTTCTCTCAGCTTCTCTGCATCAAAGTAGCAAAACAAAGAAGGCCCTAACATTCAACGTACTAGGAGCTGGCTTGAATTTCAAGTCAGGAATAGACCACTTCTGTATCCACCCCGGAGGCCGAGCCGTGATCGACGGTGTCGGTAAAGGTCTAGCGCTCACAGAGTACGACCTCGAACCGGCGAGAATGGCGCTTCACCGATGGGGCAACACTTCTGCAGGTGGACTCTGGTACGTTTTAGGGTACATGGAGGCCAAGAGGAGGCTTAAGAAAGGTGACAAGATCTTAATGATAAGTCTTGGTGCTGGGTTTAAGTGTAATAACTGTGTTTGGGAGGTCATGAAGGATTTAGAAAACCCTAATGTTTGGAAAGATTGCATTGATAGTTATCCTCCAAGGACTCTGCAGAATCCTTTCAAGGAAAAGTACAATTGGATTCATGATGAGTATCTTAACTTTGTGAGGTTCGATGTGACTAGGTTCTCCGTCAACTAA 1407 0.4869 MEVLVSLCLILPLLYSFFTLFKMILRRRGQSCYMLAYECFMPPEDTKLDTDSAARIVLRNKKLGLEEYRFLLKTMVSSGIGENTYCPRNVLEGREEFPTLDDSYGEIDEIMFDTLDGLFKKTQFSPSDIDILVVNVSLFSPAPSLTARIINRYKMREDIKAINLAGMGCSASVVAIDVVQRMFKSHPNFLAVVVSTEDLGAHWYCGSNKMLMLSNCLFRSGGCSMLFTNKSSLKHRAILKLKHMERTQFGANDEAYSCCMQVEDELGYQGFQLTKSLVKSAAQALTVNLQTMAPKILPLWELIRFLSASLHQSSKTKKALTFNVLGAGLNFKSGIDHFCIHPGGRAVIDGVGKGLALTEYDLEPARMALHRWGNTSAGGLWYVLGYMEAKRRLKKGDKILMISLGAGFKCNNCVWEVMKDLENPNVWKDCIDSYPPRTLQNPFKEKYNWIHDEYLNFVRFDVTRFSVN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01104 468 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 449 IPR012392 GO:0006633|GO:0016020|GO:0016747
Accr1g01104 468 Gene3D - 62 417 IPR016039 GO:0016746
Accr1g01104 468 PANTHER 3-KETOACYL-COA SYNTHASE 14 436 IPR012392 GO:0006633|GO:0016020|GO:0016747
Accr1g01104 468 Pfam FAE1/Type III polyketide synthase-like protein 25 310 IPR013601 GO:0006633|GO:0016020|GO:0016747
Accr1g01104 468 CDD CHS_like 11 415 - -
Accr1g01104 468 SUPERFAMILY Thiolase-like 243 418 IPR016039 GO:0016746
Accr1g01104 468 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 333 416 IPR013747 -
Accr1g01104 468 SUPERFAMILY Thiolase-like 21 233 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01104 Accr-Chr1 31427736 31432113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01104 18 461 Acyl Lipid Metabolism Gene Families AT5G04530 63.029 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01104 K15397 - gmx:100777403 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01104 1 31427736 31432113 Accr13g00212 13 2008953 2010374 CCT
Accr1g01104 1 31427736 31432113 Accr1g01104 1 31427736 31432113 ECH