Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00212 ATGGACTCCCTCACTGTACTCTACATTGTTCTGGTATCCTACTTCTGCTTCTTGATCTGGAAATTCTTCGACCGCAAAAAAGACCAAGAATGTTACATCCTCGACTACCAATGTTACAGACCCACCGACGATCGAAAGCTCTCAACTGAGTTCAGTGGCAGAGTCATCAAGCGAACCGAAAACCTCGGCCTCAACGAGTACAAGTTCCTCCTCAAAGCCATTGTCAGCTCCGGCATCGGCGAGCAAACGTACGCCCCAAGAAACGTGTTCTCCGGCCGAGAAGCCTCACCAACTCTCGCCGACGGCATCTCCGAGATGGAGGAGTTCTTCCACGACAGCATCGCCAAACTCCTCGCCAGGTCAGCCATTGCCCCCTCCGAAATCGACATCCTCGTCGTTAACATCTCCATGTTCGCCTCCCTCCCCTCCCTCTCCTCTCGAATCATTAACCACTACAAAATGAGAGAGGACATTAAGGTTTACAACCTCACCGGCATGGGTTGTAGCGCCAGCCTTATTTCCCTTGACATTATCAAGAACATTTTCAAGACTCAGAGAAATAAGTACGCTCTTTTGGTCACTTCAGAGTCTCTGAGCCCAAATTGGTATTCTGGTAACGACAAATCCATGGTTCTAGCTAATTGCTTGTTTCGTTCCGGAGGATGTGCCATTTTATTAACCAACAAAAGGTCCTTAAAGCATAAGGCCATGTTAAAGTTAAAGTGTCTTGTTAGGACCCATCACGGGTCAAGAGAAGAAGCTTACAACTGCTGCATTCAAAAGGAAGATGATCAAGGAAGGCGAGGGTTTCACCTAGGGAAGACACTCCCAAAGGCAGCCACAAGGGCTTTTGTAGACAACTTAAGGGTAATCTCACCTAAGATCTTACCCATGAGGGAGCTCCTAAGGTTCATGGTCTTGTACTTAATCAAGAAAATCAAAGTCATCGGAAGTTCGCCGCCAAAGTCCTCGTCGAGCGGCGGCCTAACAAAATCGCCGTTGAACTTCAAAACTGGGGTGGATCATTTTTGCTTACACACAGGAGGGAAAGCTGTTATCGACGGGATCGGAATGAGCTTGGATCTGAGCGAGTACGATCTGGAGCCAGCGAGGATGACTCTACACCGTTTTGGGAACACTTCTGCGAGTAGCTTGTGGTATGTGTTAGGGTACATGGAGGCGAAGAAGAGGTTGAAGAAGGGTGATACAGTGTTTATGATAAGTTTTGGTGCAGGCTTTAAATGTAACAGCTGTTTGTGGGAGGTAGTGCGAGATCTGGGAAGTAAAAATGTGTGGGACGATTGTATTGATGACTATCCACCAGTGTCTCTGGCAAATCCATTCATGGAGAAGTATAGTTGGATCAATGATCTTACCGTGGAGGATCTACCCAACGTGCAAATCCCAGATTTTCTCAAGTAA 1422 0.4726 MDSLTVLYIVLVSYFCFLIWKFFDRKKDQECYILDYQCYRPTDDRKLSTEFSGRVIKRTENLGLNEYKFLLKAIVSSGIGEQTYAPRNVFSGREASPTLADGISEMEEFFHDSIAKLLARSAIAPSEIDILVVNISMFASLPSLSSRIINHYKMREDIKVYNLTGMGCSASLISLDIIKNIFKTQRNKYALLVTSESLSPNWYSGNDKSMVLANCLFRSGGCAILLTNKRSLKHKAMLKLKCLVRTHHGSREEAYNCCIQKEDDQGRRGFHLGKTLPKAATRAFVDNLRVISPKILPMRELLRFMVLYLIKKIKVIGSSPPKSSSSGGLTKSPLNFKTGVDHFCLHTGGKAVIDGIGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDTVFMISFGAGFKCNSCLWEVVRDLGSKNVWDDCIDDYPPVSLANPFMEKYSWINDLTVEDLPNVQIPDFLK 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00212 473 CDD CHS_like 19 420 - -
Accr13g00212 473 Gene3D - 57 422 IPR016039 GO:0016746
Accr13g00212 473 SUPERFAMILY Thiolase-like 18 231 IPR016039 GO:0016746
Accr13g00212 473 SUPERFAMILY Thiolase-like 243 423 IPR016039 GO:0016746
Accr13g00212 473 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Accr13g00212 473 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 454 IPR012392 GO:0006633|GO:0016020|GO:0016747
Accr13g00212 473 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 340 421 IPR013747 -
Accr13g00212 473 PANTHER 3-KETOACYL-COA SYNTHASE 14 441 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00212 Accr-Chr13 2008953 2010374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00212 19 470 Acyl Lipid Metabolism Gene Families AT2G28630 72.113 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00212 K15397 - gmx:100809149 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01104 1 31427736 31432113 Accr13g00212 13 2008953 2010374 CCT